Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0742 ATGGATTATTCGGGCTACAACTACCAGCAGCAACCGCAACAACATTCCTATGGCTATGACCCTTCTCAGATCCAAATCCAACCCTACGATCAGTCCTATGCTTATCAACAATACTACGCATACAATCCCCAATACGCCTATTTTCCCAACACACATCAAGGCCAGTTTCAATTCCAAGCCGAACCCGCTCCTCTTCACCCTCCCGGCGTCAACCCCACCGTTCCGGAGTCAGCCCCGACTGGACCATCTCAATACAGAGGTAGGGGTGGCAGGGGTGGTAGACCATTTAGAGGGGCTGGTCGTGGTCGGGGCCACAGTAGGGGCCATGGAGTAGGGGGTGGTAGACACATACCATCTCATTCTTCTGGAGCTGCTATTTCTCATGCGGCAGGCGCACCTGTTGTTACTGGGACTGCTTCAGAGATAGAACCTTCATCAGTCTCTGTGCCAACACAATTACCTAAACCAGCTCGAGTGCAACCACCAGCACCACGTAAGGTGTGTTGTGAAATTTGTAAGGTTGAGTGCAATACTCCAGAAATCTTGGAGCAACACAAGAATGGGAAGAAACATCAGAAGAATATGAGGATGCATGAAGAATTGCAAAGGCGCAATGCTCTAAATGGACAACAGAGTGGGCAAATTCCTACTTCTCAATTGAATTTAACAGATGAACCTAAGCAAGTTCAGGAGTCTGAGAAAAATGGATGCCCAGCCGAAAATATGGGCTCTGGGGTTATAGTTAATAATCACAACGAGGAAACTCAACTGCAGAATAATGAAGGAAACATTTCTGAGGCTCCGGCTGAAGCACCTGAGGCAAAAAACATGGATAACTCTGCCGGAAGAGGCCGAGGATTAAAGCGGAAGAAGAAAGGAGGAAAAGGGGGTAAATACATGAGAACCAATGATGGTTTGAAGGCTGTGGAATCTGCACAAACCGTGTCTTTTAGATGTGAGTTGTGTGATGTTAAATGTGAGTCACAAATTGTTTACCAGAGTCATGTGACTGGGAAAAAACACTTATCGAAACTAAGGCGTGCTCATGATCCCCAAGCTGCATCTGGAGTAGGCCAGCCGCAACCTCTGTCTGGAGCACTCTTGGGGCTTCAAGCCCTTTACCCTCCTGACATCAATGCTCTGTCTAATGCAATTAATGCTCAAGTACAACAAGGTGATAATGATCCACAGGTACTTTTGGCTCAGCTCCTGATGACTGTACTATCTCAAGCACAAGTTACAGCAACAGCACAAGTGACAGGTGTCACATCTGCTCAGATGCCTGGACCCATATCTATGGCTGGACCAAGTTATGAATCCCAGTTGTTGCAGACACAAGTATCAGAAATCACAGCACATGCTAATTTAGAAAATCCTTCCGGGGAAGCAAAAACTGAGCTGTTACCTGTCCAACCACTGGAGCCAAAAGCTCAGCAAGGTTCAACTGTCAGCACCCAAATTGAAGGTGGTGGTTCTGAAACTAAATAA 1488 0.4684 MDYSGYNYQQQPQQHSYGYDPSQIQIQPYDQSYAYQQYYAYNPQYAYFPNTHQGQFQFQAEPAPLHPPGVNPTVPESAPTGPSQYRGRGGRGGRPFRGAGRGRGHSRGHGVGGGRHIPSHSSGAAISHAAGAPVVTGTASEIEPSSVSVPTQLPKPARVQPPAPRKVCCEICKVECNTPEILEQHKNGKKHQKNMRMHEELQRRNALNGQQSGQIPTSQLNLTDEPKQVQESEKNGCPAENMGSGVIVNNHNEETQLQNNEGNISEAPAEAPEAKNMDNSAGRGRGLKRKKKGGKGGKYMRTNDGLKAVESAQTVSFRCELCDVKCESQIVYQSHVTGKKHLSKLRRAHDPQAASGVGQPQPLSGALLGLQALYPPDINALSNAINAQVQQGDNDPQVLLAQLLMTVLSQAQVTATAQVTGVTSAQMPGPISMAGPSYESQLLQTQVSEITAHANLENPSGEAKTELLPVQPLEPKAQQGSTVSTQIEGGGSETK* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0742 495 MobiDBLite consensus disorder prediction 1 20 - -
Pvu10g0742 495 MobiDBLite consensus disorder prediction 472 495 - -
Pvu10g0742 495 MobiDBLite consensus disorder prediction 204 226 - -
Pvu10g0742 495 SMART ZnF_U1_5 314 348 IPR003604 GO:0003676|GO:0008270
Pvu10g0742 495 SMART ZnF_U1_5 164 198 IPR003604 GO:0003676|GO:0008270
Pvu10g0742 495 SMART c2h2final6 317 341 IPR013087 -
Pvu10g0742 495 SMART c2h2final6 167 191 IPR013087 -
Pvu10g0742 495 SUPERFAMILY beta-beta-alpha zinc fingers 314 347 IPR036236 -
Pvu10g0742 495 MobiDBLite consensus disorder prediction 139 153 - -
Pvu10g0742 495 MobiDBLite consensus disorder prediction 475 495 - -
Pvu10g0742 495 SUPERFAMILY beta-beta-alpha zinc fingers 161 199 IPR036236 -
Pvu10g0742 495 Pfam Zinc-finger of C2H2 type 169 191 - -
Pvu10g0742 495 Pfam Zinc-finger of C2H2 type 317 341 - -
Pvu10g0742 495 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 1 72 - -
Pvu10g0742 495 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 73 466 - -
Pvu10g0742 495 PANTHER OS06G0651300 PROTEIN-RELATED 1 72 - -
Pvu10g0742 495 PANTHER OS06G0651300 PROTEIN-RELATED 73 466 - -
Pvu10g0742 495 MobiDBLite consensus disorder prediction 60 164 - -
Pvu10g0742 495 MobiDBLite consensus disorder prediction 268 299 - -
Pvu10g0742 495 Gene3D Classic Zinc Finger 298 348 - -
Pvu10g0742 495 Gene3D Classic Zinc Finger 152 200 - -
Pvu10g0742 495 MobiDBLite consensus disorder prediction 204 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0742 Pvu-Chr10 19186067 19191348 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0742 - - vra:106780092 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1484 8 26198259 26205112 Pvu10g0742 10 19186067 19191348 PCT