Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1383 ATGTCCCTCAAGCGCCTCCTCTCCGCGGCCCGCCGCTCCGACCGGCGGGCCTCCGTGCTGTCCTCCATCCGATCTCTCTCGGCGTCCCCCACCCTAGCCCCCTCTGCCGCCTCTCCTCCCGCTCCTCCGCCCCCCACCGCCATGATCTACGACCGCGCTGCCGAGTCCATCAAGTACAAGCTCCGCCAGCTCGAAAACCAGGACCCCCGCTTCCTCAAACACGGCTCTCCCCGCCCCACGCTCTCCGACCACACGCACATTCTCGCCGCCCCTGAGACGCGCGTCACCACGCTTCCCAATGGCCTCCGCGTCGCCACCGAGTCCACCCTCGCCGCCCGCACGGCCACGGTCGGCGTGTGGATCGACGCCGGCTCGCGCTTCGAGACCGAGGAGACCAACGGTACCGCGCACTTCCTGGAGCACATGATCTTCAAGGGCACCGAGCGCCGCACAGCGCGCGAGCTTGAGGAAGAGATCGAGAACATGGGAGGACACCTCAACGCGTACACCTCACGCGAACAGACCACATATTACGCCAAGGTTACCGACAGTGATGTACCCCAGGCCCTCGATATCCTTGCCGACATCCTTCAGAATTCTCGATTTGAGGAAAATCGCATCAGCCGCGAACGTGATGTCATTCTCCGTGAAATGGAGGAGGTTGAGGGTCAAACTGAGGAAGTGATCTTTGATCACCTACACGCAACTGCGTTCCAGTGCACTCCTCTTGGAAGAACCATTCTTGGACCTGATAAGAACATTAGGACAATCACGAAAGCTCATCTGCAGAGCTACATTCAGACACATTACACGGCTCCTAGGATGGTGATAGCTGCATCTGGAGCTGTCAAGCATGAGGATATTGTTGATCAAGTGAACAAGTTGTTTACTAAGTTGTCGACAGATGGCACTACCACGGCTCAATTAGTTGCTAAAGAGCCAGCTATTTTTACTGGTTCTGAGGTTAGAATGCTCGATGATGATATTCCCCTTGCACAATTTGCGGTGGCTTTTGAAGGTGCATCTTGGAAGGACCCAGATTCAGTTGCTCTCATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAGGCTGCTGGAGGTGGTAAACACATGGGTTCTGAGTTAGCACAACGAGTTGGTATTAATGAAGTTGCTGAGAGCATTATGGCTTTCAATACCAATTACAAGGACACAGGTCTTTTTGGTGTTTATGCTGTTGCTAAGCCTGATAGCTTGGATGATTTGTCATATGCAATAATGTATGCTATCTTTGAAAAACAATTTCATTTGAAATCTTCGTTGCTACTACACATTGATGGAACAAGTCCAGTGGCTGAAGATATTGGCCGTCAGCTGCTTACCTATGGTAGGAGAATCCCGTTTGCTGAATTGTTTGCTAGAATTGATGCGGTTGATGCCAGTACAATTAAACGGGTTGCAAACAGGTTTATCTATGACAAGGATGTAGCAATTACTGCTTTGGGTCCTATTCAGCGTTTGCCCGACTACAATTGGTTCAGACGCAGAACCTACTGGAACAGATATTAG 1548 0.5213 MSLKRLLSAARRSDRRASVLSSIRSLSASPTLAPSAASPPAPPPPTAMIYDRAAESIKYKLRQLENQDPRFLKHGSPRPTLSDHTHILAAPETRVTTLPNGLRVATESTLAARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTERRTARELEEEIENMGGHLNAYTSREQTTYYAKVTDSDVPQALDILADILQNSRFEENRISRERDVILREMEEVEGQTEEVIFDHLHATAFQCTPLGRTILGPDKNIRTITKAHLQSYIQTHYTAPRMVIAASGAVKHEDIVDQVNKLFTKLSTDGTTTAQLVAKEPAIFTGSEVRMLDDDIPLAQFAVAFEGASWKDPDSVALMVMQAMLGSWNKAAGGGKHMGSELAQRVGINEVAESIMAFNTNYKDTGLFGVYAVAKPDSLDDLSYAIMYAIFEKQFHLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDVAITALGPIQRLPDYNWFRRRTYWNRY* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1383 515 SUPERFAMILY LuxS/MPP-like metallohydrolase 90 296 IPR011249 GO:0046872
Pvu8g1383 515 Coils Coil 152 172 - -
Pvu8g1383 515 MobiDBLite consensus disorder prediction 18 45 - -
Pvu8g1383 515 Gene3D - 309 515 - -
Pvu8g1383 515 Gene3D - 80 306 - -
Pvu8g1383 515 MobiDBLite consensus disorder prediction 19 34 - -
Pvu8g1383 515 Pfam Peptidase M16 inactive domain 257 421 IPR007863 -
Pvu8g1383 515 PANTHER BNAA01G33220D PROTEIN 32 515 - -
Pvu8g1383 515 SUPERFAMILY LuxS/MPP-like metallohydrolase 321 505 IPR011249 GO:0046872
Pvu8g1383 515 PANTHER METALLOPROTEASE 32 515 - -
Pvu8g1383 515 Pfam Insulinase (Peptidase family M16) 103 251 IPR011765 -
Pvu8g1383 515 ProSitePatterns Insulinase family, zinc-binding region signature. 124 147 IPR001431 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1383 Pvu-Chr8 21067117 21072766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1383 K17732 - gmx:100777553 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1383 8 21067117 21072766 Pvu10g0260 10 3702389 3707644 PCT