Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0260 ATGGCCTCCAACCGCCTTCTCACCCTCACCCTCACCCGCCGCCTCCGTCACCCCACCTCCGCCCGCCCCTTCTCAGCCGCCTCGACGATCTCCGCCCGCCCCGCCCCGCCCCCACCCGACGCAATGCTCTACGACCGCCTCGCCTCCGCCACCAGTGCCAAAATCCGCCGCCTCGACCATCCCGACCCCCGCTTCCTCAAGCACGGCAGCCCGGTGCCCTCCGACACCGACCACACGCGCTTCCTCGGCGCTCCCCAAACCCGCGTGACCACGCTCCCCAGCGGCCTTCGCGTGGCTACCGAGTCCTCCCTCGCCGCACGCACTGCCACCGTCGGCGTTTGGATCGACGCCGGGTCGCGGTTCGAGACCGAGGAAAGCAACGGCACCGCGCATTTCCTCGAACACATGATCTTCAAGGGCACCGCGAAGCGCACCGTGAAGGAGCTCGAGGAGGAGATCGAGAACATGGGAGGGCACCTCAATGCGTACACCTCACGCGAACAGACCACGTACTACGCTAAGGTGACGAACAAGGATGTTCCCAAGGCTCTTGATATTCTGGCTGATATCTTGCAGAATTCGAAGTTCGATGATAATAGGATCATCCGTGAGCGTGATGTGATTCTGAGGGAAATGGAGGAGGTTGAGGGACAAATGGAAGAAGTAATCTTTGACCATTTACATGCAACTGCTTTCCAGTACAGTCCACTTGGTCGAACAATTCTTGGACCTGCTCAGAATATCAGGACAATCACTAAAGATCATCTGCAAAACTACATTCAGACACACTACACAGCTCCTAGAATGGTGGTTGCCGCATCTGGAGCTGTCAAGCATGAAGAAATTGTAGAGCAAGTAAAAACGTTGTTTACCAAGTTGTCAACAGATCCCACCACAGCTTCTCAATTAGTTGCAAAAGAACCAGCCAACTTTACTGGTTCCGAGGTTAGAATTTTGGATGATGATATTCCCCTTGCACAATTTGCTGTAGCTTTTGAAGGTGCTGCATGGACAGATCCTGATTCCATTGCTCTGATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAATCCACAGGAGGTGGAAAGCACATGGGTTCTGAGTTGGCGCAACGAGTTGGCATTAATGAAGTTGCAGAAAGCATGATGGCCTTCAATACTAATTATAAGGATACAGGTCTCTTTGGTGTTTATGCTGTTGCTAAGAAGGATTGCTTGGATGACTTAAGCTATGCAATAATGCATGAGACAACCAAGTTGGCTTATAAGGTTTCAGAAGATGATGTCACTCGAGCTCGTAATCAGTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAGATATTGGGCGCCAGTTACTCACCTACAACAGAAGAATACCATTTGCAGAATTGTTTGCTAGAATTGATGCTGTGGATGCAAGCACAATAAAACGTGTTGCTAACCGATTTATTTATGACAAGGATATTGCAATTGCTGCTATGGGACCTATTCAACGTTTGCCTGATTACAACAAGTTCAGACGAAGAACCTACTGGAATCGATATTAG 1566 0.507 MASNRLLTLTLTRRLRHPTSARPFSAASTISARPAPPPPDAMLYDRLASATSAKIRRLDHPDPRFLKHGSPVPSDTDHTRFLGAPQTRVTTLPSGLRVATESSLAARTATVGVWIDAGSRFETEESNGTAHFLEHMIFKGTAKRTVKELEEEIENMGGHLNAYTSREQTTYYAKVTNKDVPKALDILADILQNSKFDDNRIIRERDVILREMEEVEGQMEEVIFDHLHATAFQYSPLGRTILGPAQNIRTITKDHLQNYIQTHYTAPRMVVAASGAVKHEEIVEQVKTLFTKLSTDPTTASQLVAKEPANFTGSEVRILDDDIPLAQFAVAFEGAAWTDPDSIALMVMQAMLGSWNKSTGGGKHMGSELAQRVGINEVAESMMAFNTNYKDTGLFGVYAVAKKDCLDDLSYAIMHETTKLAYKVSEDDVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYNRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNKFRRRTYWNRY* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0260 521 Pfam Peptidase M16 inactive domain 251 436 IPR007863 -
Pvu10g0260 521 Pfam Insulinase (Peptidase family M16) 97 244 IPR011765 -
Pvu10g0260 521 Gene3D - 303 521 - -
Pvu10g0260 521 Coils Coil 146 166 - -
Pvu10g0260 521 Gene3D - 75 296 - -
Pvu10g0260 521 SUPERFAMILY LuxS/MPP-like metallohydrolase 313 510 IPR011249 GO:0046872
Pvu10g0260 521 SUPERFAMILY LuxS/MPP-like metallohydrolase 84 290 IPR011249 GO:0046872
Pvu10g0260 521 PANTHER METALLOPROTEASE 28 521 - -
Pvu10g0260 521 MobiDBLite consensus disorder prediction 20 39 - -
Pvu10g0260 521 PANTHER BNAA01G33220D PROTEIN 28 521 - -
Pvu10g0260 521 ProSitePatterns Insulinase family, zinc-binding region signature. 118 141 IPR001431 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0260 Pvu-Chr10 3702389 3707644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0260 K17732 - gmx:100800696 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1383 8 21067117 21072766 Pvu10g0260 10 3702389 3707644 PCT