Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1369 ATGGGGTGTTTGGATGATGGGCGTTTCGCTGTTGTGATTGAAAATGGAGTGAACAATGACTGTGGTGAAGTGGGGTTGGGGAATGATGGTGGTGCCATTGAGGAGGCTGTGAAGGTTTTGTTGGAGGGTCTAGGGGAAGATGTAAACAGGGAAGGACTTAGAAAGACACCACTTCGTGTTGCCAAGGCCCTTAGTGAAGGAACCAGAGGTTACAGGCAAAAGGTGAAGGACATAGTTCAAGGTGCTTTATTCCCTGAAGCTGGTCTAGATAATAGAGTTGGTCATGCAGGTGGAGCAGGTGGACTTGTGATTGTTCGAGATCTTGACTTGTTTTCTTATTGTGAGTCTTGCTTGCTTCCATTCCAGGTCAAGTGTCATGTGGGTTATGTCCCCTCTGGTGAAAGAGTTGTTGGTTTGAGCAAGCTCTCTCGTGTTGCTGATGTATTTGCAAAACGGCTTCAAGAACCTCAACGTCTGGCAGATGAGATGTGTTCTGCTTTGCATCAGGGAATAAAGCCAGCAGGTGTCGCTATTGTACTTCAGTGCACACACATACACTTTCCAGACATAGAATCGGTCTTTCTCGACTCAAACCACAAAGGATGGGTTAAGATACTTGTTTCCTCAGGTTCTGGGGATTTTGAGAACAAAAATGCAGATGTATGGAATGATTTCTTTAGTCTTCTTAAATTTAGAGGCATCAGTGTGGATAAAATTCACTTCAGAGGATCATCTGATCCATGCTGGTGTCCTTCTCAGTCTTTTCTATCTGCCAAAGTTTCCTCAAAAATCGGACCAGTCAATCCTGTAATGATCTCTGCAGTAGCTTCGATCATTGAATCTTTGGGAGAAGATCCTTTGAGGAACGAGCTTATAGGGACCCCAAGTAGATTTGTGAAATGGTTGATGAACTTTCAAAACAGTAAGTTTGATGTGAAGTTGAATGGTTTTCTTTATGGTGGGATAGATGCTTTGAATGTAAATGAAGAGATTAATTTAAACAAAAAAATAACGTCTGAGCTGAACATACCTTTTTGGTCACAATGTGAGCATCATTTACTTCCATTTCATGGTGTTGTTCACATAGGATACCTCATATCTGATGGATTCAATCCTATAGGAAAATCACTTCTACAATCAATAGTACATTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGGCTTACCAGGCAGATAGCTGAAACCATTTCCCCACTGTTAGGGGGAGATGTGATAGTAGTTGTAGAGGCAAGTCACACATGCATGATCTCTAGGGGAATTGAGAAGTTTGGAAGTAGTACGGCTACGATTGCTGTGTTAGGACGATTTTCAACCGACCCTACTGCTAGAGCTTCATTCTTGCAGAGTATTCCAAGTCCTACATCAACTGGGGAGCAATGA 1401 0.424 MGCLDDGRFAVVIENGVNNDCGEVGLGNDGGAIEEAVKVLLEGLGEDVNREGLRKTPLRVAKALSEGTRGYRQKVKDIVQGALFPEAGLDNRVGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQEPQRLADEMCSALHQGIKPAGVAIVLQCTHIHFPDIESVFLDSNHKGWVKILVSSGSGDFENKNADVWNDFFSLLKFRGISVDKIHFRGSSDPCWCPSQSFLSAKVSSKIGPVNPVMISAVASIIESLGEDPLRNELIGTPSRFVKWLMNFQNSKFDVKLNGFLYGGIDALNVNEEINLNKKITSELNIPFWSQCEHHLLPFHGVVHIGYLISDGFNPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLLGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDPTARASFLQSIPSPTSTGEQ* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1369 466 PANTHER GTP CYCLOHYDROLASE I 1 462 IPR001474 GO:0003934|GO:0046654
Pvu8g1369 466 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 18 230 - -
Pvu8g1369 466 Gene3D - 96 232 IPR043133 -
Pvu8g1369 466 Pfam GTP cyclohydrolase I 273 457 IPR020602 -
Pvu8g1369 466 Pfam GTP cyclohydrolase I 33 185 IPR020602 -
Pvu8g1369 466 PANTHER GTP CYCLOHYDROLASE I 1 1 462 - -
Pvu8g1369 466 Gene3D - 327 459 IPR043133 -
Pvu8g1369 466 Gene3D - 29 79 IPR043134 -
Pvu8g1369 466 Gene3D - 267 309 IPR043134 -
Pvu8g1369 466 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 269 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1369 Pvu-Chr8 20639947 20644155 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1369 K01495 - gmx:100783814 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1369 8 20639947 20644155 Pvu10g0238 10 3389602 3391893 PCT