Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0238 ATGGGGCATTTGGGTGAGAATGGTTTGAATTGTGAGCTTGGAAATGGAGTGAGCATGTGTGGTAATGAAGAGAGCTTTGAGAAAGAGAGCAATTCAAGTTCCATTCAATATGCTGTCAAAGTCCTGTTGATGGGTTTAGGAGAAGATATCAACAGAGAAGGCATTAGAAAGACACCACTTCGTGTTGCCAAAGCCCTTTCTGAAGGAACCAGAGGTTATACTCAAGGTGTTAAGGAAATTGTGGAAGATGCATTGTTCCCTGAAGCTTGTGTAGGCAATAGTGAAGTTGGTGATGCAGGTGGTGAAGTAGATGGACTTGTGATTGTGAGAAACCTTGACTTTTACTCCTATTGTGAGTCTTGCATGCTACCATTCTATTTCAAGTGTCATGTGGGTTATGTGCCTTCTGGCCAAAGGGTTTTAGGGTTAAGCAAGCTCTCTCGTGTCACCAATGTCTTTGCAAAGCAACTCCAAGAGCCTCAGCGTCTTGCAGATCAGGTCTGTTCTGCATTGCAGGAAGGAATCCAACCCAAAGGTGTTGCTGTTGTGCTTCAATGCAAACACCTTCCCTTTCCAGACATGGAATCAAACACTCTTCAATCACACCACAAAGGGGTGCAGGGGATACTGGTTTCTGCAGGCTCTGGTGCTTTTCAAAACAAAGATGCACTCATCTGGGATGACTTTCTTGGCCTCCTTAACTCTAGAGGTGTTGACAAGGATCAAATTCATGATAAAGGGTCATTGGACCAATGTTGGTGTCCTTCTTTGTCTTCTTCTAAAGTTTCAGTCAAGAATGAAGAAATCAACCCTCTTATGGTCACTGCAGTGGCTTCAATTCTTAAGTCCTTAGGTGAGGATCCAACTAGGAAGGAGTTACAAGGGACTCCTGGTAGGTACACAAAATGGCTGATGAACTTCCAATGCAGCAGCATTGAAAAGAAGCTGAAGGGTTTGGTTTGGAGTGGGACAAATGGTGCTTCTAGTGACAACAACACACTACACTCAGAGCTGAACTTGCCTTTCCTGTCACAATGTGAGCATCATTTGCTTCCATTTCATGGTGTTGTTCACATAGGATACTTCACTTCCCCAGGGTTTGAGATTGAGAAATCCCTTTTGCAGACAATAGTGCATTTCTTTGGGGTTAAGCTCCAGGTTCAAGAAAGGCTCACCAAGCAGATTGCAGAAACAGTTTCTTCATTGATTGGTGAAAATGTGGTGGTGGTGGTGGAAGCAAGTCACACATGTATGATGTCTCGGGGAATTGAGAAGTTTGGTAGTAATACTGCTACCATTGCTGCATTGGGACGTTTTTCAACTGATCTTGCTGCAAGAGCTATGTTCCTGAAGAGTATTCCAAGTGCTGAATCTCTTTAA 1380 0.4362 MGHLGENGLNCELGNGVSMCGNEESFEKESNSSSIQYAVKVLLMGLGEDINREGIRKTPLRVAKALSEGTRGYTQGVKEIVEDALFPEACVGNSEVGDAGGEVDGLVIVRNLDFYSYCESCMLPFYFKCHVGYVPSGQRVLGLSKLSRVTNVFAKQLQEPQRLADQVCSALQEGIQPKGVAVVLQCKHLPFPDMESNTLQSHHKGVQGILVSAGSGAFQNKDALIWDDFLGLLNSRGVDKDQIHDKGSLDQCWCPSLSSSKVSVKNEEINPLMVTAVASILKSLGEDPTRKELQGTPGRYTKWLMNFQCSSIEKKLKGLVWSGTNGASSDNNTLHSELNLPFLSQCEHHLLPFHGVVHIGYFTSPGFEIEKSLLQTIVHFFGVKLQVQERLTKQIAETVSSLIGENVVVVVEASHTCMMSRGIEKFGSNTATIAALGRFSTDLAARAMFLKSIPSAESL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0238 459 Gene3D - 100 236 IPR043133 -
Pvu10g0238 459 Gene3D - 325 455 IPR043133 -
Pvu10g0238 459 PANTHER GTP CYCLOHYDROLASE I 1 1 458 - -
Pvu10g0238 459 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 22 220 - -
Pvu10g0238 459 Pfam GTP cyclohydrolase I 275 453 IPR020602 -
Pvu10g0238 459 Pfam GTP cyclohydrolase I 36 189 IPR020602 -
Pvu10g0238 459 PANTHER GTP CYCLOHYDROLASE I 1 458 IPR001474 GO:0003934|GO:0046654
Pvu10g0238 459 Gene3D - 22 80 IPR043134 -
Pvu10g0238 459 Gene3D - 261 314 IPR043134 -
Pvu10g0238 459 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 261 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0238 Pvu-Chr10 3389602 3391893 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0238 K01495 - gmx:100792313 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1369 8 20639947 20644155 Pvu10g0238 10 3389602 3391893 PCT