Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1348 ATGGCTCAAAATTCTCATGATCTAAAGTTTGGCAATGGGGAGAATGAAGAAAATGTCTCAGATACAGCTTATTCTGACAAAGACCAGAAAGGTCAACCTGGTTCAAAGATGATTAATCCAAATGAGCCCAAGGAAAATTCATATCCAGTTTCTTCTGCTGATGTACCCCATTCAAAACCAAGAGTTCACTCAGAGGATCCATTTGAAAAGGGATCAATGAGATCCACATATGAGTTACAAAAGAGCAGGAAGGATGGTGATGCTAAACATTTCACTGACACTCCAGCTGATGACAATGGCAGCAATAGGAGTGGCACTGATTCTGCCCATCGAGGCCAGGGAGTAGGTTCTACTGACAACAGTAGAAAACCTTCAAAACAAACTATTGGATCAGAACGCAATTTTGACCGTTCACCCCTTCATCGCCAGGCAAAAACCCCTGGCAGAGATAGTCCTTCTTGGGAAGTAAAGAATTCATATGACACCAGCCATGGTACTCCAGGAAGGTCCCGGTTAAGACCATCTAACCGAGGTGATGAAACTCCTGATAAAGGTGCTGCTGTTCCAAAATTTGGTGAGTGGGATGAGAGCAACCCTGCATCAGCTGATAACTACACTCATATTTTCAACCAAGTGCGGGAGGAGAAGCAGGTGGGGGCTGGACATGTGCCAGGCACACCTAATGCTAGACAATATGGTGCGCGGAATCATCCTGATGATGAGAAAGCTCAGAGTTGCTGCTTTTGGTGGGGCAAAAAATGA 762 0.4488 MAQNSHDLKFGNGENEENVSDTAYSDKDQKGQPGSKMINPNEPKENSYPVSSADVPHSKPRVHSEDPFEKGSMRSTYELQKSRKDGDAKHFTDTPADDNGSNRSGTDSAHRGQGVGSTDNSRKPSKQTIGSERNFDRSPLHRQAKTPGRDSPSWEVKNSYDTSHGTPGRSRLRPSNRGDETPDKGAAVPKFGEWDESNPASADNYTHIFNQVREEKQVGAGHVPGTPNARQYGARNHPDDEKAQSCCFWWGKK* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1348 253 MobiDBLite consensus disorder prediction 217 244 - -
Pvu8g1348 253 MobiDBLite consensus disorder prediction 58 96 - -
Pvu8g1348 253 MobiDBLite consensus disorder prediction 173 190 - -
Pvu8g1348 253 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 249 IPR040387 -
Pvu8g1348 253 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 249 - -
Pvu8g1348 253 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 182 217 IPR008700 -
Pvu8g1348 253 MobiDBLite consensus disorder prediction 1 199 - -
Pvu8g1348 253 MobiDBLite consensus disorder prediction 10 24 - -
Pvu8g1348 253 MobiDBLite consensus disorder prediction 97 134 - -
Pvu8g1348 253 MobiDBLite consensus disorder prediction 25 53 - -
Pvu8g1348 253 MobiDBLite consensus disorder prediction 152 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1348 Pvu-Chr8 20139504 20145813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1348 K13456 - gmx:100499220 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1348 8 20139504 20145813 Pvu10g0220 10 3181144 3187302 PCT