Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0220 ATGGCACAACGTTCTCATGTACCCAAATTTGGCAATTGGGATAGTGGAGATAATGTCCCTTACACAGCATATTTTGACAAGGCCCGGAAAGGTCGAACTGGTGCAAAAATAATAAATCCAAATGACCCTGAGGAAAATTCTGATTTGGGTCTTGACAATCCATCATCTGAGCACCTACCTCCACCCAAACCAAGAGTTAGTTCAGAGGATCCATCCGGAAAGGGATCATTGCATTTGGAAGATGATCCTAAGCCTTTCATCGACTCTCCAGCTCGTCATGACAATGCAAGCAATAGGAGTGGCAGCAGAAGCCACGGAGTACCTCCTGCTGATAACCGTAGAAGACCTTCTATGCAAAGTGCTGGCTCTGAGCACAGCATTGACCGTTCTCCACTTCATCGCCAGGCCAGACCCCCAGGCAGAGACAGTCCCCTGTGGGAACCAAAGAATTCATATGACAACATCCAGGGAACACCTGGGAGATCTCGGTTAAGACAGGCTAACCGGGGAGATGAAACACCAGATAAAGGTGCAGCTGTTCCAAAGTTTGGTGACTGGGATGTGAACAACCCAGCATCAGCAGATGGCTTTACTCACATTTTTAACAAAGTTAGGGAGGAGAGACAGGGAGGGCCAGCACAAGATGCGCCGGGCACGCTTAATGGTAGACTACAACAGAACAATCGCCAATTCAATGATGACAAAGTCCAGTGTTGCTGCTTTGCCTGGGGCAAAAAATGA 741 0.4804 MAQRSHVPKFGNWDSGDNVPYTAYFDKARKGRTGAKIINPNDPEENSDLGLDNPSSEHLPPPKPRVSSEDPSGKGSLHLEDDPKPFIDSPARHDNASNRSGSRSHGVPPADNRRRPSMQSAGSEHSIDRSPLHRQARPPGRDSPLWEPKNSYDNIQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQDAPGTLNGRLQQNNRQFNDDKVQCCCFAWGKK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0220 246 MobiDBLite consensus disorder prediction 149 163 - -
Pvu10g0220 246 MobiDBLite consensus disorder prediction 74 89 - -
Pvu10g0220 246 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 243 IPR040387 -
Pvu10g0220 246 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 243 - -
Pvu10g0220 246 MobiDBLite consensus disorder prediction 1 191 - -
Pvu10g0220 246 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 174 209 IPR008700 -
Pvu10g0220 246 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 32 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0220 Pvu-Chr10 3181144 3187302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0220 K13456 - gmx:100808509 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1348 8 20139504 20145813 Pvu10g0220 10 3181144 3187302 PCT