Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1342 ATGTATGCTGATCGGGTGGAGAGTGGAACTCGGAGGTCGGTGAAAGAACGTCTTGATGGGAATTTCCTCACTGATTCTACTCGCCAACACAAAGTCACCGGAAAGAGGCAGAGGCAAGATGACAAGTGGAAACATGATCTCTATGACGACAATGAGCCCCAGCTCTATAATCGCAAGGTCACTGCTCAAGATCTTCGTTTGAAGCTTCAAAAGAAAGGCCTGCATCCTGGAGGTCAAACTGGAAAGAGTTCTGTTCCTCGTGAGAGGGATCTCCGTGAAAGGCTATCAGGGACGATGACTCCACAACCTAAAAACTATGACCCACCAAAGCCTAAAGTGGCTACTAAACCTAGCGGTAAAAGTATCGATGTTGAGACTCCTTCAGTACATAACAAAAGATCAGCTAACCCAACTCCTAAAAATGTGTCCCGAAAGGCTGACGCTTCTCTGGATGAATTTTTGCTGTCACTGGGTCTCGAAAAGTATCTCATAAGTTTTCAAGCTGAAGAAGTTGATATGACTGCACTCATTCATATGACTGATGAGGATCTCAAGGCCATGGGTATACCAATGGGACCAAGAAAGAAGATACTTTTAGCCTTGGAGTCAAAAGACTGA 618 0.4498 MYADRVESGTRRSVKERLDGNFLTDSTRQHKVTGKRQRQDDKWKHDLYDDNEPQLYNRKVTAQDLRLKLQKKGLHPGGQTGKSSVPRERDLRERLSGTMTPQPKNYDPPKPKVATKPSGKSIDVETPSVHNKRSANPTPKNVSRKADASLDEFLLSLGLEKYLISFQAEEVDMTALIHMTDEDLKAMGIPMGPRKKILLALESKD* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1342 205 SUPERFAMILY SAM/Pointed domain 144 202 IPR013761 -
Pvu8g1342 205 Pfam SAM domain (Sterile alpha motif) 147 202 IPR001660 GO:0005515
Pvu8g1342 205 SMART SAM_4 142 205 IPR001660 GO:0005515
Pvu8g1342 205 CDD SAM_superfamily 149 202 - -
Pvu8g1342 205 MobiDBLite consensus disorder prediction 1 53 - -
Pvu8g1342 205 MobiDBLite consensus disorder prediction 121 143 - -
Pvu8g1342 205 Gene3D - 148 205 IPR013761 -
Pvu8g1342 205 ProSiteProfiles SAM domain profile. 145 199 IPR001660 GO:0005515
Pvu8g1342 205 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 125 192 - -
Pvu8g1342 205 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 145 - -
Pvu8g1342 205 PANTHER OSJNBA0060P14.15 PROTEIN 1 145 - -
Pvu8g1342 205 PANTHER OSJNBA0060P14.15 PROTEIN 125 192 - -
Pvu8g1342 205 MobiDBLite consensus disorder prediction 1 55 - -
Pvu8g1342 205 MobiDBLite consensus disorder prediction 69 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1342 Pvu-Chr8 20036855 20041010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1342 37 204 Glycosyltransferase AT3G07170 59.172 4.67e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1342 - - gmx:100527300 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1342 8 20036855 20041010 Pvu10g0216 10 3118978 3129108 PCT