Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0216 ATGTACGCTGATCGCGTGGAGAATGGAGGGCGGAGATCCGTGAAGGAACGCCTAAATGGGAATGGTGTCAGTGGCCCCACTCGGCAGCAGCACCAGCGTCAAATCACCGGCAAAAGGTCGAGGCAAGATGATAAGTGGGAACATGATCTCTTTGACGATGATGAACCACGGATCACTAATCGCAAGGTTAGTTCTCAAGATCTACGTCTCAAGCTTCAAAGGAAAGGTCTTCAACCTGCATCTCAGAGTGGAAAGAGTTATGCTCCAAAGATGCGAGATCTCCGTGAAAGGCTATCAGGGACAATGACAGTACAACCTACAAATAGAGATCTGCCAAAATCAAAAGCTGTTAAACCAAGCAGTAAAAATGTTGGTGTTGAGGCCCCTGCAGCGCAGATCAAAAGGCCAGCTGAACCAGCTCCTAAAAGGTCACGGAAGGCTGATTCTTCAATTGATGAATTTTTGCGGTCCTTGGGTCTTGAAAAGTACCTCATTACTTTTCAGGCTGAAGAAGTTGACATGACAGCTCTCAATCATATGACTGATGAAGATCTCAAGGCTATGGGCATGCCAATGGGACCAAGAAAGAAGATACTTTTAGCATTGGAGTCGAAAGTCTAA 621 0.4622 MYADRVENGGRRSVKERLNGNGVSGPTRQQHQRQITGKRSRQDDKWEHDLFDDDEPRITNRKVSSQDLRLKLQRKGLQPASQSGKSYAPKMRDLRERLSGTMTVQPTNRDLPKSKAVKPSSKNVGVEAPAAQIKRPAEPAPKRSRKADSSIDEFLRSLGLEKYLITFQAEEVDMTALNHMTDEDLKAMGMPMGPRKKILLALESKV* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0216 206 Pfam SAM domain (Sterile alpha motif) 147 203 IPR001660 GO:0005515
Pvu10g0216 206 MobiDBLite consensus disorder prediction 1 67 - -
Pvu10g0216 206 MobiDBLite consensus disorder prediction 36 67 - -
Pvu10g0216 206 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 135 - -
Pvu10g0216 206 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 131 193 - -
Pvu10g0216 206 MobiDBLite consensus disorder prediction 100 149 - -
Pvu10g0216 206 PANTHER OSJNBA0060P14.15 PROTEIN 131 193 - -
Pvu10g0216 206 PANTHER OSJNBA0060P14.15 PROTEIN 1 135 - -
Pvu10g0216 206 CDD SAM_superfamily 153 203 - -
Pvu10g0216 206 SUPERFAMILY SAM/Pointed domain 149 203 IPR013761 -
Pvu10g0216 206 ProSiteProfiles SAM domain profile. 146 206 IPR001660 GO:0005515
Pvu10g0216 206 SMART SAM_4 143 206 IPR001660 GO:0005515
Pvu10g0216 206 MobiDBLite consensus disorder prediction 72 91 - -
Pvu10g0216 206 Gene3D - 148 206 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0216 Pvu-Chr10 3118978 3129108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0216 41 205 Glycosyltransferase AT3G07170 59.281 2.25e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0216 - - gmx:100784706 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1342 8 20036855 20041010 Pvu10g0216 10 3118978 3129108 PCT