Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1233 ATGGAGTTCGAGGACCGCTTCAGACAGAACCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCACTAAGCACTGGTATTGCAAATGCATGTGGCCAAAATATTAAAGACTATATGGTGGAAAAGCTTGGCATAGAGAAAAGCAAAATTGATGACTTGTCCAACCTCCTCTACAAAAACTATGGAACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGACTATGATGAATATCACAGTTTTGTTCATGGAAGATTACCTTACGAAAACTTGAAACCAGACCAAGTTCTGAGGAACCTTTTGCTGAGCCTGCCCTATAGGAAACTAATCTTCACAAACTCAGACAAAGTCCATGCAGTTAAGGCACTTAGCAGGCTTGGATTAGAGGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCAATCCATAAAAGCACTGTCTCTGATGATGAAGATGACATTGAGTTTATGGGGGTTTCAAGCACAACCAATCCAACCACAAAAAAAAATGCTAGTGGCTCACAAATCTTTGACATCATTGCCCATTTTTCTCAACCCAATCCCAACACAGTTTTGCCTAAAACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAATTGTCTCTCAAGATAGCCAACCTTAACCCGCAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACATACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTTGGAAAATCTCAGAGAATTAAAGGAGCAGATTACGCATTAGAGAGCATCCACAACCTTAGAGAGGCCGTGCCAGAACTATGGGAAGATGACATAAAATCAGAAGTTGCTTACCCTGGAAACCTTGCTGTGGAAACATCTGTGACTGCTTAG 909 0.4059 MEFEDRFRQNQRPKYDCLLFDLDDTLYPLSTGIANACGQNIKDYMVEKLGIEKSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDQVLRNLLLSLPYRKLIFTNSDKVHAVKALSRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFMGVSSTTNPTTKKNASGSQIFDIIAHFSQPNPNTVLPKTPIICKPSENAIELSLKIANLNPQRTLFFEDSVRNIQAGKRVGLHTVLVGKSQRIKGADYALESIHNLREAVPELWEDDIKSEVAYPGNLAVETSVTA* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1233 302 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 302 - -
Pvu8g1233 302 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 302 - -
Pvu8g1233 302 CDD HAD_5NT 17 254 IPR010237 -
Pvu8g1233 302 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 253 IPR010237 -
Pvu8g1233 302 SUPERFAMILY HAD-like 14 281 IPR036412 -
Pvu8g1233 302 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 281 - -
Pvu8g1233 302 Gene3D - 9 99 - -
Pvu8g1233 302 SFLD C1.5.3: 5'-Nucleotidase Like 10 281 IPR010237 -
Pvu8g1233 302 Gene3D - 102 287 IPR023214 -
Pvu8g1233 302 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 208 253 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1233 Pvu-Chr8 15165224 15168201 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1233 K07025 - gmx:100795391 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1233 8 15165224 15168201 Pvu8g1233 8 15165224 15168201 ECH
Pvu8g1233 8 15165224 15168201 Pvu10g0152 10 2338922 2341851 PCT