Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0152 ATGGAGTTCGAAGACCGCTTCAGACACCAGGCTCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCCCTCAAATCTGGTATTGCAGAAGCATGTCTCAAAAATATTAAAGACTACATGGTTGAGAAGCTTGGCATACACCCTAGCAAAATTGATGACTTGTCCAACCTACTTTACAAGAATTATGGAACAACTATGGCTGGTCTAAGGGCAATTGGATATGACTTTGACTATGATGAGTATCATAGTTTTGTTCATGGGAGATTACCTTATGAGAACCTAAAACCAGACCCAGTTCTGAGGAACCTGTTGCTGAGCCTGCCCTATAGGAAACTTATCTTCACAAATGCAGACAAAGTCCACGCAGCTAAGGCACTTAACAGGCTTGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAGAGCACTGTTTCTGATGATGAAGATGACATTGAGTTTGTGGGATCAAGGACAACCACTCCAACCACTACTAGTAATGGTCCAGCCACTTCTCAAATCTTTAACATCATAGAACATTTTGCTAAGCCCAATCCCAGTACAATCTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAATTGGCCCTCAAGATAGCCGACCTTAAACCTCAAAGAACATTGTTCTTTGAGGACAGTACCCGTAACATACTAGCTGGAAAACGTGTGGGGCTTCACACTGTGCTGATTGGTACATCACAAAGATGTAAGGGTGCAGATTATGCCTTGGAAAGCATTCACAACCTTAAGGAAGCTGTGCCACAACTATGGGAAGCTGATATAAAATCAGAAGTTGCATACCCTGCAAAGATTGCTGTGGAAACAACAGTCACAGCTTGA 912 0.4156 MEFEDRFRHQAQRPKYDCLLFDLDDTLYPLKSGIAEACLKNIKDYMVEKLGIHPSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAAKALNRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGSRTTTPTTTSNGPATSQIFNIIEHFAKPNPSTILPKTPIICKPSENAIELALKIADLKPQRTLFFEDSTRNILAGKRVGLHTVLIGTSQRCKGADYALESIHNLKEAVPQLWEADIKSEVAYPAKIAVETTVTA* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0152 303 SUPERFAMILY HAD-like 15 281 IPR036412 -
Pvu10g0152 303 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 303 - -
Pvu10g0152 303 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 17 253 IPR010237 -
Pvu10g0152 303 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 282 - -
Pvu10g0152 303 Gene3D - 82 281 IPR023214 -
Pvu10g0152 303 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 209 254 IPR006439 -
Pvu10g0152 303 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 303 - -
Pvu10g0152 303 SFLD C1.5.3: 5'-Nucleotidase Like 10 282 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0152 Pvu-Chr10 2338922 2341851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0152 K07025 - gmx:100787007 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1233 8 15165224 15168201 Pvu10g0152 10 2338922 2341851 PCT