Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1212 ATGTCTTCTACTGTGGACTCAGTTGTTCGAGACCCTTTCAAAAACTCATGGAAAACCCTTCGTTTCCCCAACATCAAACCCAGCCAACTTCTTCGTTTCTTCTTCAAAGCGGGTCTTGCAGCTTCAACCTTCTTCCTCATAACCCTAGTTTTTCACCTTACCCTATCCTACAACCAATCCCAATACCATAACAGCAGCCACACATCCTTCAAATACATCCTCCAACAACAGAAAACCACTCACCAACAACAACCGCCCACCAACATCTCCCACCTCTTCTTTGGTATTGGCGGCTCCGTCGCCACGTGGGACACACGCCGCCAATACTCAGACATGTGGTGGCGCCGCGGTGTCACCAGAGGCTTTGTGTGGCTCGACAGCCACCCATCGGGGAACGCGACGTGGCCGGAGAGTTCACCGCCGTATAAGGTCTCCGGTGACACGTCAGCGTTCCAGTACACGTGCTCGTACGGGTCGCGATCGGCGATTCGTGTGGCGCGGATTGTGAAGGAGAGCTTCGAGCTGGGGGTGGAAAACGTGAGGTGGTTCGTTATGGGTGATGACGACACCGTTTTCTTCACCGACAACCTCGTTATGGTTTTGTCGAAGTATGATCATAATGAAATGTACTACGTGGGTGGGAATTCTGAGAGTGTGGAACAGGATGTGATACATTTTTACACTATGGCGTTTGGTGGTGGTGGGTTTGCGATAAGTTACCCTCTGGCGAAGGTGTTGGTCAGAATTTTGGACGGTTGCATTGATCGTTACGCTGAGTTTTATGGGTCTGATCAGAAAATTCAGAGTTGCATCAGTGAGATTGGGGTTCAGGTTACCAAAGAACCAGGTTTTCATCAGGTAGATATAAGGGGGAAGCCATACGGGTTGTTAGCGTCACATCCGGTGGCTCCGTTGGTTTCGTTACACCATATGGATTACGTGGATCCGATATTTCCCAACATGACCCGGGTTGACGCCGTTAAAAAACTGGTAACCGCCTACGAAAGAGATTCGGGTCGGGCTCTGCAGAAGAGCTTCTGTTACGACCTCCGACGAAACTGGTCCGTTTCGGTGTCGTGGGGCTACAGCGTTGAGATATACCCCACTCTACGCAGGGCCAAGGAACTAGAAACGGCGTTTCGGACTTTCCGCACGTGGCGGAGTTGGAGTGATGGCCCGTTTATTTTCAATACCCGACCCGTTGGTTCCGATCCGTGTGAGAAACCAGTGTTGTTTATGCTGGATCGGGTTCTGAATGTGGGCGAGGACAAGACCCGGTCTATCTATAGAAGGCACGAAGACACAGTGGGGAACGTGTGCAAGCGTGATGAGTACGCGCAGGCTTTAGACGTGCAATACGTCAACGTTTTAGCACCACGCTTTATGCCGGACGAGTGGAAAAAGGCGCCACGTAGGCAATGCTGCGAGATAGTGAACGCCTCAGATGGGGTGATGAACAATAATAGCGTAGTTGGCGTTAAGATCAGAGGCTGCCATCGATTGGAGAGTGTGACTCCTCCCTAG 1524 0.5125 MSSTVDSVVRDPFKNSWKTLRFPNIKPSQLLRFFFKAGLAASTFFLITLVFHLTLSYNQSQYHNSSHTSFKYILQQQKTTHQQQPPTNISHLFFGIGGSVATWDTRRQYSDMWWRRGVTRGFVWLDSHPSGNATWPESSPPYKVSGDTSAFQYTCSYGSRSAIRVARIVKESFELGVENVRWFVMGDDDTVFFTDNLVMVLSKYDHNEMYYVGGNSESVEQDVIHFYTMAFGGGGFAISYPLAKVLVRILDGCIDRYAEFYGSDQKIQSCISEIGVQVTKEPGFHQVDIRGKPYGLLASHPVAPLVSLHHMDYVDPIFPNMTRVDAVKKLVTAYERDSGRALQKSFCYDLRRNWSVSVSWGYSVEIYPTLRRAKELETAFRTFRTWRSWSDGPFIFNTRPVGSDPCEKPVLFMLDRVLNVGEDKTRSIYRRHEDTVGNVCKRDEYAQALDVQYVNVLAPRFMPDEWKKAPRRQCCEIVNASDGVMNNNSVVGVKIRGCHRLESVTPP* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1212 507 Pfam Protein of unknown function, DUF604 221 475 IPR006740 -
Pvu8g1212 507 PANTHER FRINGE-RELATED 25 504 - -
Pvu8g1212 507 PANTHER GLYCOSYLTRANSFERASE 25 504 - -
Pvu8g1212 507 Gene3D - 79 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1212 Pvu-Chr8 14714402 14716862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1212 9 506 Glycosyltransferase AT2G37730 55.058 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1212 - - gmx:100813750 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1212 8 14714402 14716862 Pvu8g1212 8 14714402 14716862 ECH
Pvu1g2430 1 49582824 49588584 Pvu8g1212 8 14714402 14716862 ECH