Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2430 ATGAGCCACAATCGCTTGGAACCTGGTCATGAGTCTCCTCTTAAAGCATCGAGACTATCTTTTTTCCCCGAAAGACTTGGTGATATGGTTGTACTCTTAATAAGGTTTGGCATACTTGTGTGCCTTGTTGCCTCCATATCACTTGCCCTCCATTCAGCATTTGCTAAACCAGACCGATGGTTCCCCTTACCGGAGCATATACATACTGTACAGAATACTTCTGTCATTGACAGCGGACCAACAAACATCTCACATATTCTGTTTGGCATTGCTGGGTCATCTAACACTTGGCATGACCGTAGCAACTACAGTAAACTATGGTGGAAACCAAACACCACAAGAGGTTTTGTTTGGCTTGACAAGAAGCCTGAGATTTTGCATGATGACATGTTACTTCCATATCAAATCTCACAGGGCTGGAGGCGGTTCCAGTATGTGCACTCAGCATCTGCAGTTCGGATTGCCCGGATAGTTTATGAGAGCTTTAAACTTGGTTTACCAAATGTTAGGTGGTTTGTAATGGGAGACGATGATACTGTGTTCTTTACTGAGAACTTAGTTACTGTCTTGGGAAAATATGATCACAATCAAATGTACTATATTGGTGGGAGTTCTGAGAGTGTTGAGCAAGATGTGATGCATTCTTATAACATGGCCTTTGGTGGAGGTGGATTTGCAATCAGTTATGCATTAGCTGCTCAACTAGACAAAATGATGGATGGTTGTCTAAGCAGATACTACTATTTTTATGGTTCTGATCAAAGGGTTTGGGCCTGTGTGAATGAAATTGGGGTGCCTCTTACCAGAGAAGTTGGATTCCACCAGCTTGACATAAGAGGGGATCCATATGGTCTTCTAGCTGCACATCCCTTGGTACCACTTCTATCACTCCATCACCTTGGCCAATTGAACTCCTTGTTTCCCAACCAGACTCAATTTCACTCAATGGAAAAGCTCATCAGTGCATACGACGCTGACCCTGCCCGGATAGTGCAGCAAAGTTTTTGCTATGATCATAAGCACAGATGGTCAATATCTATCTCATGGGGTTACACTATACAAATATATCCATTATTGTTGGTAGCAGCAGACTTGCAGATGCCACTGCAGACATTTAAGACTTGGCGAAGTTGGAAGGACGGTCCCTTCACATTCAATACTAGACCAATGAGCTCTGACCCGTGCCAGAAGCCAGCTGTGTTTTTCCTGGATGAGGTTACAAAGGTTGGAAAAAGTGGAAGTGTCACTATCTACAAGAGACATGAAGGCAATGAAGGGAAGTGCACAAGAAAAGACATTAATAACGTGGAAGTGGAAAGAATTAGAGTTTCTGCCTTGAAGCTGGACCCAGAATATTGGAAGAATGTACTGCGCAGGCATTGCTGCCAATTACTGTGGGGTGGAAGCATAAAGAATGGTAGTATGCATATCAGGATTAGGAAGTGCAGACCTCAAGAAACAGTCACTGCTTAG 1473 0.4338 MSHNRLEPGHESPLKASRLSFFPERLGDMVVLLIRFGILVCLVASISLALHSAFAKPDRWFPLPEHIHTVQNTSVIDSGPTNISHILFGIAGSSNTWHDRSNYSKLWWKPNTTRGFVWLDKKPEILHDDMLLPYQISQGWRRFQYVHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTVFFTENLVTVLGKYDHNQMYYIGGSSESVEQDVMHSYNMAFGGGGFAISYALAAQLDKMMDGCLSRYYYFYGSDQRVWACVNEIGVPLTREVGFHQLDIRGDPYGLLAAHPLVPLLSLHHLGQLNSLFPNQTQFHSMEKLISAYDADPARIVQQSFCYDHKHRWSISISWGYTIQIYPLLLVAADLQMPLQTFKTWRSWKDGPFTFNTRPMSSDPCQKPAVFFLDEVTKVGKSGSVTIYKRHEGNEGKCTRKDINNVEVERIRVSALKLDPEYWKNVLRRHCCQLLWGGSIKNGSMHIRIRKCRPQETVTA* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2430 490 PANTHER FRINGE-RELATED 10 488 - -
Pvu1g2430 490 PANTHER BNAA05G27650D PROTEIN 10 488 - -
Pvu1g2430 490 Pfam Protein of unknown function, DUF604 210 462 IPR006740 -
Pvu1g2430 490 Gene3D - 76 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2430 Pvu-Chr1 49582824 49588584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2430 7 488 Glycosyltransferase AT3G11420 54.400 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2430 - - gmx:100802549 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2430 1 49582824 49588584 Pvu1g2430 1 49582824 49588584 ECH
Pvu1g2430 1 49582824 49588584 Pvu8g1212 8 14714402 14716862 ECH