Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1157 ATGACTATCCCTCGGTTATGTAACGACCAAGTTATAACTGCTGTGAATGGGCAATTTCCTGGACCTACTATACAAGTGCGAGAGGGTGACACTCTTGTGGTTCATGTATTGAACAAGTCGCCTTACGACGTTACCCTGCATTGGCATGGAATATTTCAACTTCTAAGTGGATGGGCAGATGGTCCAGAATATGTAACTCAATGTCCAATTCGTCCCAATCATAACTTCACTTACAGATTCAAAATCGATGGACAAGAGGGAACTCTTTGGTGGCATGCTCATGCATCCTTCCTTCGTGCAACAGTCCATGGTGCACTTTTTATCCATCCTAGGAGAAACCATCCTTATGCATTTCCTAAGCCCTACAAGCATGTTCCCATCTTATTTGCTGAATGGTGGAAATCCAATGTTATGGAGTTTAGTGACCAAACACTTACCCCATCTGTTGCTTTTATGATCAATGGCTTGCCTGGTGACCTATACAATTGCTCTCAAGATCAGATGTTCAAACTGAAGGTCAAGCCTGGTAAGACCTACTTGCTAAGGATAATCAACACCAACTTCATAAGCCAAATGTTCTTTAAGGTTGCGAATCACAGGTTTACTGTGGTTGCAATCGATGCAGTGTACACAACACCTTATGCCACCGATGTGGTGGTGATTGCCCCTGGTCAAACTACTGATGTGTTACTTGAAGCTAATCAACCAATTGGTTCCTATTACATGGCTGCGTCAATTTATAACACGATACAGGCAGCATTTGACAACACCACAACTCGAGGACTCGTTGTATATAAAGGATCCAAATCAACTACTCCTTTGATGCCAATCATGCCACTTTTCAATGACACAAAAACGGCTCATAAGTTCTACACCGAACTAACCGGGCTTGTAGATAGGCCTCACTGGCTCCAATGTCCAAATGAAGTTGATGAGAATATGTTCATTACATTTGGGTTGAATCTAGCACCTTGTCCACAGAATGAGACATGTTTTGGCCCAAAAAACACTTTAGTGTCTTCCAGCATGAACAATGAATCTTTTGTTCTTCCTAGTCAGAAGAAAATGTCGATGTTGGAAGCATTCTACTATAATGAAAGTGGCATATACACCAAGGATTTTCCAAATAGGCCTCCCCTGGAGTTTGACTACACCAACCCAAATAATAGCCTTGACTTCTCTCTCCTATTTGCACCCAAATCAACCAAGGTGAAAAAGTTGAAGTTCAATTCCACCGTGGAGATTGTGTTGCAAAACACTGCTTTGCTTGATACAGAGAACCACCCCATGCACATTCACGGATTCAACTTCTTTGTCCTAGCTCAGGGCTTTGGAAACTTCAATGCTACACGAGATAGGGTAAAATTCAATTTAGTGAACCCGCAAATGCGAAATACAATTGCTGTGCCTGATGCAGGGTGGGCTGTGATCAGATTCAAAGCAAATAATCCAGGTATATGGATGATACACTGCCATGTGGACAATCACATGTCATGGGGGATGGCCACGGCTTTCGAAATTGAGAATGGACCTACTCCATCTTCCACATTGCCTCCCCCTCCTCCTGATCTACCCACTTGCTAA 1584 0.4287 MTIPRLCNDQVITAVNGQFPGPTIQVREGDTLVVHVLNKSPYDVTLHWHGIFQLLSGWADGPEYVTQCPIRPNHNFTYRFKIDGQEGTLWWHAHASFLRATVHGALFIHPRRNHPYAFPKPYKHVPILFAEWWKSNVMEFSDQTLTPSVAFMINGLPGDLYNCSQDQMFKLKVKPGKTYLLRIINTNFISQMFFKVANHRFTVVAIDAVYTTPYATDVVVIAPGQTTDVLLEANQPIGSYYMAASIYNTIQAAFDNTTTRGLVVYKGSKSTTPLMPIMPLFNDTKTAHKFYTELTGLVDRPHWLQCPNEVDENMFITFGLNLAPCPQNETCFGPKNTLVSSSMNNESFVLPSQKKMSMLEAFYYNESGIYTKDFPNRPPLEFDYTNPNNSLDFSLLFAPKSTKVKKLKFNSTVEIVLQNTALLDTENHPMHIHGFNFFVLAQGFGNFNATRDRVKFNLVNPQMRNTIAVPDAGWAVIRFKANNPGIWMIHCHVDNHMSWGMATAFEIENGPTPSSTLPPPPPDLPTC* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1157 527 Gene3D - 3 122 IPR008972 -
Pvu8g1157 527 Pfam Multicopper oxidase 125 267 IPR001117 -
Pvu8g1157 527 TIGRFAM laccase: laccase 3 527 IPR017761 GO:0046274|GO:0048046|GO:0052716
Pvu8g1157 527 SUPERFAMILY Cupredoxins 307 527 IPR008972 -
Pvu8g1157 527 PANTHER LACCASE-7 2 527 - -
Pvu8g1157 527 ProSitePatterns Multicopper oxidases signature 1. 485 505 IPR033138 -
Pvu8g1157 527 ProSitePatterns Multicopper oxidases signature 2. 490 501 IPR002355 GO:0005507
Pvu8g1157 527 Gene3D - 123 281 IPR008972 -
Pvu8g1157 527 Gene3D - 329 527 IPR008972 -
Pvu8g1157 527 CDD CuRO_3_LCC_plant 369 510 IPR034289 GO:0005507
Pvu8g1157 527 SUPERFAMILY Cupredoxins 10 134 IPR008972 -
Pvu8g1157 527 CDD CuRO_2_LCC_plant 125 265 IPR034285 -
Pvu8g1157 527 Pfam Multicopper oxidase 374 509 IPR011706 GO:0005507|GO:0016491
Pvu8g1157 527 PANTHER MULTI-COPPER OXIDASE 2 527 IPR045087 -
Pvu8g1157 527 Pfam Multicopper oxidase 5 112 IPR011707 GO:0005507
Pvu8g1157 527 CDD CuRO_1_LCC_plant 1 110 IPR034288 GO:0005507
Pvu8g1157 527 SUPERFAMILY Cupredoxins 118 301 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1157 Pvu-Chr8 13210543 13213824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1157 K05909 - qsu:111988990 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1157 8 13210543 13213824 Pvu10g0062 10 998679 1001584 PCT