Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0062 ATGAAATGTTTTGTGTTTTGTGTTCTTGCTCTTGTGCTAGCTTCTTCATTGGCTCATGCTGCGATTGTGGAACACACTTTCAATGTGGAAGACATTTCTGTGCAACGTTTGTGTCGTCAACAAGTGATCACTGCCGTTAATGGAACCCTACCTGGACCTACAATCAACGCTCGAGAGGGTGACACTGTTGTTGTTCATGTGTTCAACAAATCACCCTACAATCTTAGTCTTCATTGGCACGGAATTCTTCAATTTTTAACTCCATGGTCAGACGGTCCTGAATTTGTAACTCAATGCCCAATACATTCCGGCAGCAGTTACACATACAGATTTAACCTAACGGGACATGAAGGGACACTTTGGTGGCATGCACACACCTCTTTTCTACGTGCTACACTCTATGGTGCCCTTTTCATTCGCCCTCGCCAAGGACACTCCTACCCATTTCCTAAAGTCTACCAAGAACTCCCTATTCTGCTTGGTGAGTGGTGGAATGCTAATGTTGTAGAGGTTGAGCACAATGCAACGGAGTCCCAAGGGGCACCACAGCAGTCAGATGCGTATACAATTAACGGTTTACCCAGCGATGTGTATAACTGCTCTCAAGATGGAACGTACGAGGTGAAAGTGAAGCAAGGAAAAACCTACATGCTGCGCATCATCAACGCTGCACTCAATGCGCAACACTTCTTCAAGGTAGCGAACCACACGTTAACGGTGGTAGCCATCGACGCCGCCTACACCAACCACTACGACACCGAAGTTGTGGTGGTTGCTCCGGGTCAAACCGTTGACGTGCTCCTCAGAACAAACCAACCCCGCGGTTCTTACTACATGGCTTTCACCCCTTACCATTCCGCTCCTGCTATAACAATCAACGCCAACATCACCCGAGGGCTCATCATTTACGAGAATGCCACGTCAGCAAAGCCCGTCATGCCAGACCTCCCGGCCCAGTCCGACACCCCGACAGCCCACCGCTTCTACACCAACATCACGGGCCTGGCCGGCGGGCCGCACTGGGTCCCCGTGCCACGCCACGTGGACGAGCACATGTTCGTCACTTTCGGGATTGGCTTCACGGTGTGCAACAATTTCTCGGGAGGCTGCAGTGGGTCCACGCGCCCACTCTCCGCCAACATGAACAACGAGTCCTTCGTGCTGCCACGTGGCAGAGGGGTATCGATGCTTGAAGCGTCTTACGGCGGCGACGTCGACGGCGTGTACACCAGGGATTTTCCGAATCGGCCTCCGGTTGAGTTTGACTACGTCAACCCAAACGTATCGAGTGAGACTTTCGCGTTCCAAATCGCGCCGAAATCAACGAAGGTGAAGACGTTGAAGTTCAACTCAACGGTTGAGATTGTGCTTCAGAACACCGGCATCATTACGACGGAGAACCACCCCATTCACGTTCACGGTTTTAACTTCCATGTTTTGGCTCAAGGGTTCGGGAATTACAACGCCACTAGAGACGAACCCAAGTTCAATTTTGTGAACCCTCAAATTCGTAACACCATTTCTGTGCCCGTCGGAGGTTGGTCCGTCATTAGATTCCAAGCAAATAATCCAGGTGTTTGGCTTGTGCATTGCCATTTGGAGACTCATTTGCCGTGGGGGCTAGCTATGGCTTTTGAGGTTGAGAATGGACCCACTCCTTCGTTCTCGGTGCCACCACCTCCTTCTGATCTTCCCAAGTGCTGA 1704 0.51 MKCFVFCVLALVLASSLAHAAIVEHTFNVEDISVQRLCRQQVITAVNGTLPGPTINAREGDTVVVHVFNKSPYNLSLHWHGILQFLTPWSDGPEFVTQCPIHSGSSYTYRFNLTGHEGTLWWHAHTSFLRATLYGALFIRPRQGHSYPFPKVYQELPILLGEWWNANVVEVEHNATESQGAPQQSDAYTINGLPSDVYNCSQDGTYEVKVKQGKTYMLRIINAALNAQHFFKVANHTLTVVAIDAAYTNHYDTEVVVVAPGQTVDVLLRTNQPRGSYYMAFTPYHSAPAITINANITRGLIIYENATSAKPVMPDLPAQSDTPTAHRFYTNITGLAGGPHWVPVPRHVDEHMFVTFGIGFTVCNNFSGGCSGSTRPLSANMNNESFVLPRGRGVSMLEASYGGDVDGVYTRDFPNRPPVEFDYVNPNVSSETFAFQIAPKSTKVKTLKFNSTVEIVLQNTGIITTENHPIHVHGFNFHVLAQGFGNYNATRDEPKFNFVNPQIRNTISVPVGGWSVIRFQANNPGVWLVHCHLETHLPWGLAMAFEVENGPTPSFSVPPPPSDLPKC* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0062 567 CDD CuRO_2_LCC_plant 157 303 IPR034285 -
Pvu10g0062 567 Pfam Multicopper oxidase 29 143 IPR011707 GO:0005507
Pvu10g0062 567 Gene3D - 371 567 IPR008972 -
Pvu10g0062 567 ProSitePatterns Multicopper oxidases signature 2. 530 541 IPR002355 GO:0005507
Pvu10g0062 567 PANTHER MULTI-COPPER OXIDASE 5 567 IPR045087 -
Pvu10g0062 567 Gene3D - 153 337 IPR008972 -
Pvu10g0062 567 SUPERFAMILY Cupredoxins 22 166 IPR008972 -
Pvu10g0062 567 Pfam Multicopper oxidase 413 549 IPR011706 GO:0005507|GO:0016491
Pvu10g0062 567 TIGRFAM laccase: laccase 21 567 IPR017761 GO:0046274|GO:0048046|GO:0052716
Pvu10g0062 567 Gene3D - 13 141 IPR008972 -
Pvu10g0062 567 SUPERFAMILY Cupredoxins 149 338 IPR008972 -
Pvu10g0062 567 PANTHER LACCASE-7 5 567 - -
Pvu10g0062 567 CDD CuRO_1_LCC_plant 25 141 IPR034288 GO:0005507
Pvu10g0062 567 Pfam Multicopper oxidase 156 304 IPR001117 -
Pvu10g0062 567 SUPERFAMILY Cupredoxins 376 567 IPR008972 -
Pvu10g0062 567 ProSitePatterns Multicopper oxidases signature 1. 525 545 IPR033138 -
Pvu10g0062 567 CDD CuRO_3_LCC_plant 408 550 IPR034289 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0062 Pvu-Chr10 998679 1001584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0062 K05909 - gmx:100812879 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1157 8 13210543 13213824 Pvu10g0062 10 998679 1001584 PCT