Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1143 ATGGCTGCAACAAAAGCTCCATCCAATGAGCAGGTTTACAAAGTTCCCCTCAAAGTTTTGGTGGACAGAAGTGAAAACAAAGTTGTGTTTGCTGAGGCAAGTAAAGATTTCGTTGACGTTCTACTGAGTTTCTTAGCATTGCCTTTAGGTACTATTGCAAGACTCGTTGCTAAGGAGTCAAACATTCCACCAGTGAAACTTGGCAGCCTGAGTTCATTGTATGAAAGTGTGTCAAATCTTGAAGAAGAGCATCTATGGACACCGACATGCAAAGAAATGCTTCTTCACCCAAGGAGTTCTATGGAATCTTATTACCAACACCTGAAACTCAACATCGACGACACTGACCCCACAAACTATTTCCTATGTGAAAACTTGGATTGTAGTAGAAAGCCAAGTGGGAGCCTTTTAAGCATTTTCAACAATCAAAGATGCAGTTGTGGAAAACTAATGAACAGAATAGTGTCCCCAGAAAATAATACTCTAGAAAATGGCTTTGTTAAGGAAACTGCTACTTTTATAATTTGTGACGATCTTTCTGTGTTGCCTAATATTCTTGTAACAAGTCTGAATCTGCTCCAGAAGCTTGGAATCAAAGACATGGATGCTATTGAGGAACAAACTGTGGATATCAGCAAGAGGGAGGTGGTTGATCTTCTAAAGTTGTCGATGATATCAAAGAGCCCTTTGACAGATTTTATCTTTGAGAAGAAACCACGAGTTGATGATTTCAACCCAATAAACGAATCCTGGTTTGAGAGAGGAGAAGAATCATCTGATGAAGGTAGAAGGATAGTTGTGAGGGCACTGGTAAGAAAATCAAATAAAAAGATTATGTTTACTGGTGCAGAGGAAGATTTTGCAGACTTTCTTTTTAGTTTTTTGACTTTACCTTTGGGTGGGGTGTTGCACATGTTGGAAGGAAATTCTTCTTTGGGCTGCATAGATAAATTACACAAAAGTATTTCCGAACTGAGTCCTGATCGATATTTAAGGTCACAGAGACTAAAAGAGGAATTAGCTAATCCTAAGTGTGCCACTCAATTCACCATCAGTGGTCAGATATTACCAATTGGCGAGGTATCCTTGCCTGTTTATTATTGCAATACTTTCTTTGATGGCGTAAGGCACACTTTCGCTCTTTCTACCTCAACCAGAACTCCTTATTATGACTATGACAAAAATGTTCGATTGGAGATTTTAGATGGAAAGTCCTCTATTGGGGATTTTTGGATTGGTAAAGGATTTGCCAAAGGACCATCAACGTTCATGGTGACAGATGATTTGGTTGTGACTCCAATGTCATCCATTTCTGCTGTTTCATATCTAAATAGGTCACAAGTCCCTCTCTCTGACTTGGAAGAAAGGGTCATTAGCGTTGGTGTGAAGGAGGGTTTGGCCATACTAAAAGCTTCCCTCACCTCAACATCTGCTTTATCAAACGCTCTACAACAATTCACAAAAATCAATGAGCTGGAGAATTTATCAACTATTTCTATCTTGTAA 1506 0.3918 MAATKAPSNEQVYKVPLKVLVDRSENKVVFAEASKDFVDVLLSFLALPLGTIARLVAKESNIPPVKLGSLSSLYESVSNLEEEHLWTPTCKEMLLHPRSSMESYYQHLKLNIDDTDPTNYFLCENLDCSRKPSGSLLSIFNNQRCSCGKLMNRIVSPENNTLENGFVKETATFIICDDLSVLPNILVTSLNLLQKLGIKDMDAIEEQTVDISKREVVDLLKLSMISKSPLTDFIFEKKPRVDDFNPINESWFERGEESSDEGRRIVVRALVRKSNKKIMFTGAEEDFADFLFSFLTLPLGGVLHMLEGNSSLGCIDKLHKSISELSPDRYLRSQRLKEELANPKCATQFTISGQILPIGEVSLPVYYCNTFFDGVRHTFALSTSTRTPYYDYDKNVRLEILDGKSSIGDFWIGKGFAKGPSTFMVTDDLVVTPMSSISAVSYLNRSQVPLSDLEERVISVGVKEGLAILKASLTSTSALSNALQQFTKINELENLSTISIL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1143 501 Pfam Protein of unknown function (DUF674) 14 461 IPR007750 -
Pvu8g1143 501 PANTHER DUF674 FAMILY PROTEIN 1 490 - -
Pvu8g1143 501 PANTHER OS01G0153900 PROTEIN 1 490 IPR007750 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1143 Pvu-Chr8 12970601 12973869 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1143 - - pvu:PHAVU_008G110700g 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1143 8 12970601 12973869 Pvu10g0078 10 1163012 1165275 PCT