Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0078 ATGTTATTTTGCATGGCTTCCAAGGAAGAACCAAAGCTCCCTTTGACGCTTTTGGTGGACAAAGAAAGAAACTCTGTGGTTGTTGCTGAAGCAAGTGGAGACTTCATAGACATTTTGTTCAGTTTTCTCACCCTTCCACTGGGAACTATCACAAGGCTTGTGTCCAAGAAGGAGGAAGAGATTGGTTGCATGAACAATTTGTACCAGAGCTTGGAAAATTCTGGTGATGATGTGTTCTGGAACCATATTTGCAAGAAAATGTTGCTTTTTCCACGCAACCCTTGTGCAGCACTTTGCCAGAAACTGAAGCTGAAGTTGGATGATACAAAGCCTGTGAAGTACTTCATGTGTAGCAAGAGGTGTAGAAAGGGTGGTGATTGGTTCTTGAGCACTTTTGCTGAGGCTACCTGCTTCTGTGGGAAGTTGATGGACAAAGAAATGAAGCTGCATGGAGATTATTCTGATGAAGGAAGTAATGAAGATGGGGTTTTTGTTAAGGGGAAAACCATGTACTTGATCTTTGATGATTTAAAGGTGCTGCAGAGCTCTCCTGGTAACACTGTTCAGCAACTTGTCCAACTTGGCTACAAAAGCTTCCACAAGCTGACAAAGAAGTACCTTAGTGTTGGCATAAAGGAGATTTTGGATTTGCTAAAGCAAGCATTGACCTCCAATTCTCCTCTTAGTGACGTATTCTTAGAAAATGGAGGATCTGTGAGAGTGTGCACTTTCTCACCAATAGTTAGAGCAGAAAACCAAGGCTGGATAAATTACAATTCCAGCATAAACCTAAAGGTAACAGTGAGAAAATCAAAGAAAACAATACTGTATGCTGAAGCTGAGGGAGATTTTGTTGATTATCTATTCAGTTTCCTCACAACACCACTTGGATCTGTTCTAGAGCTATTGGATGAAAAAATTTCTCTGGGATGTATGAATAACTTGCACAAAAGTGTGAAGGATCTGAATCCATTATGGTTCACAAATCCTTCAGGCACTCCTTTGCTGAACCTCAGGGTGGCTCCTCAGTTTGGTTTTAAGAGGCAGCCAACAAAACTTTGTGAAGAACACAGTCCTTGCTACTGGTATGGCACAGGAGTGATAAAGAATAACATATGCTATGCCATTGGGAATGGAGTGATTTCAAAGGACCATAGCCTAGTAAAACATGCAGTGGCCATGAAGCATTTTGATCCAAGATCTTGTGATGGCACAAAAGAGTCAGCTTTGGGCTTTGTGAGGAGACCATCACTGTTTGTTGTGTGGAATGATCTCCAAGTAACACCATTGGCAAATGCTTCCTGTATTTCATTCCTGCAAAAGCTCAATGTTCCACTTGATGACTTGGAGGATCATCAGCTGAGAATTGAGGAGACAGAGGCACTAAACTTGCTGGGAGCTTCTTTGACTTCCAAAGCTGCTTTGACAGAAGGCCTGTTCTATCTCTTGAAGCCAAAGAAACAAACTAAAGCATGA 1476 0.4173 MLFCMASKEEPKLPLTLLVDKERNSVVVAEASGDFIDILFSFLTLPLGTITRLVSKKEEEIGCMNNLYQSLENSGDDVFWNHICKKMLLFPRNPCAALCQKLKLKLDDTKPVKYFMCSKRCRKGGDWFLSTFAEATCFCGKLMDKEMKLHGDYSDEGSNEDGVFVKGKTMYLIFDDLKVLQSSPGNTVQQLVQLGYKSFHKLTKKYLSVGIKEILDLLKQALTSNSPLSDVFLENGGSVRVCTFSPIVRAENQGWINYNSSINLKVTVRKSKKTILYAEAEGDFVDYLFSFLTTPLGSVLELLDEKISLGCMNNLHKSVKDLNPLWFTNPSGTPLLNLRVAPQFGFKRQPTKLCEEHSPCYWYGTGVIKNNICYAIGNGVISKDHSLVKHAVAMKHFDPRSCDGTKESALGFVRRPSLFVVWNDLQVTPLANASCISFLQKLNVPLDDLEDHQLRIEETEALNLLGASLTSKAALTEGLFYLLKPKKQTKA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0078 491 Coils Coil 54 74 - -
Pvu10g0078 491 PANTHER DUF674 FAMILY PROTEIN 8 488 - -
Pvu10g0078 491 Pfam Protein of unknown function (DUF674) 9 458 IPR007750 -
Pvu10g0078 491 PANTHER OS01G0153900 PROTEIN 8 488 IPR007750 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0078 Pvu-Chr10 1163012 1165275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0078 - - gmx:100819920 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1143 8 12970601 12973869 Pvu10g0078 10 1163012 1165275 PCT