Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1103 ATGAGAGCCACTGCAATCACTATAAATCCCTCGTTTTCTCCACCCTTTTGTTCCTCATCGTCTTCTCCACACCCTACTAGATTTCAACGTTTTAAGTCCGCAGAATTAAAACCCATCACTCTTTCTTGTATAGGCGCACGGTTGTGCTCTTTTCAGGGGTTGAAAGCTACTGGGGGTAGAAAAAGTTTTGTGCTTGAGGCTGGAAACATCATCACGGCAGAGGTTGATTCTCTTGGAGAAGGGGAGAACGAGGGTGCTTTGCTTGGCTCCGAGAATGAGGGCAATTCAAGACCTCGGAGAATCGCTCTCTTTGTTGAACCTTCTCCCTTTGCATATGTCTCAGGATACAAAAACCGGTTTCAAAACTTCATCAGATGCCTTCGTGAAATGGGGGATGAGGTGATGGTTGTGACAACACATGAGGGAGTGCCCCAGGAATTTCATGGAGCCAAATTAATTGGATCTTGGAGCTTTCCCTGCCCTTTGTATCAGAAGGTACCTCTCTCCTTGGCACTTAGTCCAAGAATAATTTCAGAGGTAGCCCGGTTTAAGCCTGACATAATTCATGCATCGTCGCCAGGCATAATGGTTTTTGGAGCTCTTATCATTGCAAAACTACTGTGTGTTCCTATTGTCATGTCCTACCACACCCATGTACCTGTGTACATCCCAAGATATACCTTTAGCTGGTTGGTGAAACCCATGTGGTTGATCATAAAATTTCTTCACAGAGCAGCTGATCTGACTCTGGTTCCATCTGCTGCCATAGCGGGGGATCTCCTAGCAGCTAGAGTCACAGCAGCTAACAAGATTCGTCTTTGGAACAAGGGTGTTGATTCTGAAAAATTCCATCCCCAATACCGCTCCTATGAAATGCGATTAAGACTAAGCGATGGTGAACCGGAGAAACCCTTGATAGTTCATGTTGGACGGCTTGGAGTAGAGAAGAGTTTAGATTTTCTCAAAAGGCTTATGGATAGGCTTCCTGATGCCCGAATTGCTTTCGTTGGCGATGGACCATACAGGGAGGAGCTAGAGAAAATGTTTGAAGGTATGCCTGCAGTGTTCACTGGGATGTTAGGAGGGGAAGAACTGTCCCAAGCATATGCTAGTGGAGATGTGTTTGTCATGCCTTCAGAGTCAGAGACACTTGGTCTTGTGGTTTTGGAAGCCATGTCTTCAGGGATACCTGTGGTGGCAGCACGTGCTGGAGGTATTCCCGATATTATCCCTGCAGATCAAGACGGAAAAACTAGCTATCTGTATAATCCTGGAGATCTTGAAGATTGCTTGAGCAAACTAAGGCCACTTTTGCAGAACAAAGTGTTAAGAGAAACCATGGCAAAAGCTGCGCGTGAAGAGATGGAGAAGTATGATTGGAAGGCTGCCACACAAAAGATTCGCAACGAGCAATACAATGCTGCCATTTGGTTCTGGCGCAAGAAAAGGGCTCAACTGTTGAGACCCTTCCAATGGCTGTCAAAACGGTTTTCCCCATCACCACAAGTCAACTAA 1515 0.4594 MRATAITINPSFSPPFCSSSSSPHPTRFQRFKSAELKPITLSCIGARLCSFQGLKATGGRKSFVLEAGNIITAEVDSLGEGENEGALLGSENEGNSRPRRIALFVEPSPFAYVSGYKNRFQNFIRCLREMGDEVMVVTTHEGVPQEFHGAKLIGSWSFPCPLYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWNKGVDSEKFHPQYRSYEMRLRLSDGEPEKPLIVHVGRLGVEKSLDFLKRLMDRLPDARIAFVGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVAARAGGIPDIIPADQDGKTSYLYNPGDLEDCLSKLRPLLQNKVLRETMAKAAREEMEKYDWKAATQKIRNEQYNAAIWFWRKKRAQLLRPFQWLSKRFSPSPQVN* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1103 504 CDD GT4-like 100 472 - -
Pvu8g1103 504 Gene3D Glycogen Phosphorylase B; 296 458 - -
Pvu8g1103 504 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 13 503 - -
Pvu8g1103 504 Pfam Glycosyltransferase Family 4 118 281 IPR028098 -
Pvu8g1103 504 Pfam Glycosyl transferases group 1 304 440 - -
Pvu8g1103 504 Gene3D Glycogen Phosphorylase B; 100 295 - -
Pvu8g1103 504 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 101 468 - -
Pvu8g1103 504 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 13 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1103 Pvu-Chr8 12298576 12304423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1103 47 421 Glycosyltransferase AT5G01220 75.200 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1103 K06119 - gmx:100807850 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1103 8 12298576 12304423 Pvu8g1103 8 12298576 12304423 ECH
Pvu8g1103 8 12298576 12304423 Pvu10g0054 10 863590 868400 PCT