Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0054 ATGACCAACTCTACAACGTTGTCTCTCTCTATAAATCACTCTCTCTCTCCTCCTTTTCCTACACCTCCCACACTCACCACAACCCCCTCTTTTTTTTCCATTTCCCCTCACAACTCTCTTAGATTTGCTTATATTCAATCCTTTCGGCCAAAACCCATTGCTCCCTTTTGCAGAAAAACACGATTCTGCTCTCTTCAGGGGTCATCGAGTGCGAAAAGTAGAAAAAGTTTGGCGCTTGGAACCACCCACATGACTATAGCAGAGGACAGTTTGTTGGAGGTGGTGGAGGAGGACGAAGAGAGTCCTCCTGATTTTTCTTTGCTCGACCCTGAGAGCAATTCGAGGCCTCGCAGAATTGCTCTCTTCGTTGAGCCTTCTCCTTTTGCATATGTCTCAGGATACAAAAATCGTTTCCAGAATTTTATAAAATACCTTCGTGAAATGGGAGATGAGGTAATGGTCGTGACAACACATGAAGGAGTACCAAAGGAATTTCATGGAGCCAAATTAATTGGATCGCGAAGCTTCCCCTGTCCCTGGTATCAAAAGGTACCCCTTTCTTTGGCACTTAGTCCAAGAATAATTTCTGCAGTTGCTCAGTTTAAGCCAGACATAATACATGCATCATCGCCAGGCATAATGGTGTTTGGTGCTCTTATCATCGCAAAGCTGCTAAGTGTTCCTATTGTAATGTCCTATCACACCCACGTACCAGTATACATTCCAAGATACACCTATAGCTGGTTGGTGCAACCCATGTGGTGGGTCATAAAATTTCTGCATACAGCAGCAGATCTTACTCTGGTGCCATCAGCTGCCATTGGAAGGGATCTTGAAGCAGCTAGAGCAACAGCAGCTAACAAGATCCGTCTTTGGAACAAGGGTGTTGATTCTGAAAGTTTCCATCCACGATTCAAGTCCCATGAAATGAGACTAAGACTGAGTAATGGTGAACCTGATAAGCCCTTAATAGTTCACGTTGGACGGCTTGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAGTCTCATGGATAGGCTTCCTGAAGCACGAATTGCCTTTATCGGAGATGGACCCTACAGGGAGGACTTAGAGAAACTGTTTGAAGGCATGCCAGCAATCTTCACTGGAATGCTGGGAGGGGAAGAACTATCTCAAGCATATGCAAGTGGAGATGTGTTTGTTATGCCTTCAGAGTCAGAGACACTTGGCCTTGTTGTTTTGGAGGCCATGTCATCTGGGATCCCTGTGGTGGGAGCACGTGCTGGTGGCATCCCAGACATAATCCCTGAAGACCAAGATGGAAAAATTGGTTTCCTCTATACTCCAGGTGATCTAGAAGATTGTTTGAGCAAACTGAAACCTCTTTTGGAGGACAAAGAGTTGAGAGAAACAATGGGAATAGCTGCACGTTTGGAGATGGAGAAGTATGATTGGAGGGCAGCCACTAGAAAGATTCGCAATGAAAATTACAATGCTGCAATTTGGTTCTGGAACAAGAAAAGGGCTCAACTATTGAGACCCTTTCAATGGTTGGCTCAAAGGATTTTCCCTTCATCTCCTGATGAGGAAGTAGACTCACAGGCTTGTTGA 1590 0.4472 MTNSTTLSLSINHSLSPPFPTPPTLTTTPSFFSISPHNSLRFAYIQSFRPKPIAPFCRKTRFCSLQGSSSAKSRKSLALGTTHMTIAEDSLLEVVEEDEESPPDFSLLDPESNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFHGAKLIGSRSFPCPWYQKVPLSLALSPRIISAVAQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTYSWLVQPMWWVIKFLHTAADLTLVPSAAIGRDLEAARATAANKIRLWNKGVDSESFHPRFKSHEMRLRLSNGEPDKPLIVHVGRLGVEKSLDFLKSLMDRLPEARIAFIGDGPYREDLEKLFEGMPAIFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPEDQDGKIGFLYTPGDLEDCLSKLKPLLEDKELRETMGIAARLEMEKYDWRAATRKIRNENYNAAIWFWNKKRAQLLRPFQWLAQRIFPSSPDEEVDSQAC* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0054 529 Gene3D Glycogen Phosphorylase B; 296 476 - -
Pvu10g0054 529 Pfam Glycosyltransferase Family 4 136 299 IPR028098 -
Pvu10g0054 529 Gene3D Glycogen Phosphorylase B; 133 480 - -
Pvu10g0054 529 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 26 519 - -
Pvu10g0054 529 Pfam Glycosyl transferases group 1 319 470 IPR001296 GO:0016757
Pvu10g0054 529 CDD GT4-like 118 488 - -
Pvu10g0054 529 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 26 519 - -
Pvu10g0054 529 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 119 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0054 Pvu-Chr10 863590 868400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0054 59 432 Glycosyltransferase AT5G01220 78.877 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0054 K06119 - gmx:100780899 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1103 8 12298576 12304423 Pvu10g0054 10 863590 868400 PCT