Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1096 ATGGAAACAATGTTGCCTCAGAAGCAAGCAGAGGAAGCAATAGTGGCAAGCCTTAACGAGACAGAGAGTGAAGTGGGGGGAGTGAGGGAGGAAGAGAAAGAGTTGCAAGACCACTCCATGTTCAGTCTCAAGAGCATACTCTGGCATGGAGGCTCTGTTTGGGACGCATGGTTCAGCTGTGCTTCAAATCAAGTGGCTCAAGTGCTGTTGACACTTCCCTGTTCTTTCTCTCAACTTGGAATGGTATCAGGGATCTTGCTTCAGATTTTCTATGGAATCATGGGAAGTTGGACAGCGTATATAATAAGTGTCCTCTACATGGAGTACCGTGCCAGAAAGGAAAAAGAAAATGTCAGTTTCAAGAACCATGTCATTCAGTGGTTTGAAGTGCTTGATGGGTTGCTGGGTCCGTATTGGAAAGCGGTGGGGTTAGCCTTCAACTGTACTTTCCTTCTCTTTGGATCTGTGATTCAGCTTATAGCATGTGCAAGTAACATTTACTACATAAATGACCACTTGGATAAACGGACTTGGACTTACATCTTTGGAGCTTGCTGTGCCACCTCTGTGTTCATACCCTCCTTCCACAATTACCGTATTTGGTCTTTTCTTGGACTTGGAATGACCACTTACACTGCTTGGTACATGGCTATAGCAGCTCTCATTCATGGCCAGGCAGAAAATGTGACTCACACTGGTCCAAAAAAGCTAGTGCTGTACTTTACCGGAGCCACCAACATACTGTACACGTTTGGTGGACATGCAGTTACTGTAGAGATTATGCATGCCATGTGGAAGCCACAGAAGTTCAAGTACATATACTTGCTGGCCACTTTGTACGTTTTCACACTAACGATTCCTTCTGCTGCTGCTGTTTACTGGGCTTTTGGTGATGAACTTCTCAATCATTCCAATGCCTTCTCTCTCCTCCCCAAAAATGGATTTCGTGATTCTGCTGTAATCCTCATGCTCATTCACCAGTTCATCACTTTCGGTTTCGCTTGTACTCCACTGTACTTTGTCTGGGAGAAGGTAATTGGGATGCATGACACAAAAAGCATTTGTCTAAGGGCACTTGCAAGGTTGCCAGTGGTGATACCAATATGGTTTTTTGCCATAATCTTCCCTTTCTTTGGACCCATCAACTCTGCAGTTGGAGCTCTGCTGGTTAGTTTCACTGTCTACATCATCCCCGCCTCAGCACATATGCTCACTTACAGAAAAGCCTCTGCAAGACAGAATGCTGCCGAGAAGCCTCCTTTCTTTATGCCAAGCTGGACTGCAATGTATCTGTTCAATGCATTCATTGTGGTGTGGGTTTTGGTGGTTGGGTTTGGGTTTGGAGGATGGGCCAGCATGTCCAACTTCATCAGGCAAATTGACACTTTTGGACTCTTTGCCAAGTGCTACCAATGCAAGTCCCCAACTCCACCAGCCATGGCAGCAGCACCACCCCCTCACCACCATCAACACTGA 1476 0.46 METMLPQKQAEEAIVASLNETESEVGGVREEEKELQDHSMFSLKSILWHGGSVWDAWFSCASNQVAQVLLTLPCSFSQLGMVSGILLQIFYGIMGSWTAYIISVLYMEYRARKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATSVFIPSFHNYRIWSFLGLGMTTYTAWYMAIAALIHGQAENVTHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAAAVYWAFGDELLNHSNAFSLLPKNGFRDSAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFFAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYRKASARQNAAEKPPFFMPSWTAMYLFNAFIVVWVLVVGFGFGGWASMSNFIRQIDTFGLFAKCYQCKSPTPPAMAAAPPPHHHQH* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1096 491 PANTHER OS05G0424000 PROTEIN-RELATED 5 475 - -
Pvu8g1096 491 Coils Coil 18 38 - -
Pvu8g1096 491 Pfam Transmembrane amino acid transporter protein 49 442 IPR013057 -
Pvu8g1096 491 PANTHER AUXIN INFLUX TRANSPORTER 5 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1096 Pvu-Chr8 12110562 12117440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1096 7 491 Organic Solute Cotransporters AT2G21050 74.280 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1096 K13946 - gmx:100810532 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1096 8 12110562 12117440 Pvu10g0038 10 695438 702043 PCT