Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0038 ATGTTGTCTCAGAAGCAAGCAGAGGAAGCAATAGTCACAAACCTCAACGAGACAGAACATGAAGTGGGAAGAACAAGGGATGAAGAGAGGGAGCAAGACCACTCCATGTTCAGCCTCAAAAGCATCCTCTGGCATGGTGGTTCTGTTTGGGATGCATGGTTCAGCTGTGCCTCAAATCAAGTGGCTCAAGTGCTCTTGACACTCCCATACTCCTTCTCTCAACTTGGCATGCTTTCAGGCATCTTGTTTCAGGTGTTCTATGGAATCATTGGAAGCTGGACTGCTTATCTAATCAGTGTCCTCTACGTTGAGTACCGCACCAGAAAGGAAAAGGAAAACGTCAGCTTCAAGAACCATGTCATTCAGTGGTTCGAAGTCCTTGATGGGTTACTTGGTCCATATTGGAAAGCAGTGGGGCTAGCCTTCAACTGTACTTTCCTCCTCTTTGGATCTGTGATACAGCTTATAGCATGTGCAAGTAACATCTATTACATAAATGACAAATTGGATAAACGGACTTGGACTTATATTTTTGGAGCTTGCTGTGCCACCACTGTGTTCATACCTTCCTTCCACAATTACCGAATCTGGTCATTTTTGGGCCTTGGAATGACCACTTACACGGCTTGGTACCTTGCTGTAGCATCTATCGTTCATGGCCAGGTGGAAAATGTCACACACTCGGGTCCAGCAAAGCTAGTGCTCTACTTCACTGGAGCCACTAACATACTCTACACGTTTGGAGGACATGCTGTGACTGTAGAGATCATGCATGCCATGTGGAAGCCGCAAAAGTTCAAGTACATCTACCTGCTGGCCACTTTGTACGTTTACACACTAACGATTCCCTCCGCCGTCGCCGTCTATTGGGCTTTTGGTGATATGCTTCTTGACCACTCCAACGCCTTCGCTCTCCTCCCCAAGTCTGCCTTCCGTGACGCCGCCGTTATCCTCATGCTCATTCACCAGTTCATAACATTTGGGTTTGCGTGCACTCCGTTGTATTTTGTGTGGGAGAAGGTGATTGGGATGCACGACACAAAAAGCATATGTTTGAGGGCACTTGCACGGTTGCCGGTGGTGATACCTATATGGTTTTTGGCTATAATCTTCCCTTTCTTTGGTCCCATTAATTCTGCTGTTGGATCTCTTCTAGTTAGTTTCACTGTCTACATCATCCCTTCCTTAGCCCATATGCTCACTTACAGAAAACCCTCTGCCAGACAGAATGCTGCAGAGAAGCCTCCTTTCTTCATGCCAAGTTGGACTGCAATGTATGTGTTGAATGCATTCATTGTTGTGTGGGTTTTTGTTGTTGGATTTGGGCTTGGAGGATGGGCCAGCATTACAAACTTCATAAGGCAAATTAACTCATTTGGGCTTTTTGCTAAGTGCTACCAGTGCCCTCGACCAGCACCACATGTTGTGGCAGCAGCACCCCCTCATGCCCATAATTAG 1458 0.4664 MLSQKQAEEAIVTNLNETEHEVGRTRDEEREQDHSMFSLKSILWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQVFYGIIGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAVASIVHGQVENVTHSGPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVYTLTIPSAVAVYWAFGDMLLDHSNAFALLPKSAFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPSLAHMLTYRKPSARQNAAEKPPFFMPSWTAMYVLNAFIVVWVFVVGFGLGGWASITNFIRQINSFGLFAKCYQCPRPAPHVVAAAPPHAHN* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0038 485 PANTHER OS05G0424000 PROTEIN-RELATED 2 472 - -
Pvu10g0038 485 Pfam Transmembrane amino acid transporter protein 45 438 IPR013057 -
Pvu10g0038 485 PANTHER AUXIN INFLUX TRANSPORTER 2 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0038 Pvu-Chr10 695438 702043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0038 3 468 Organic Solute Cotransporters AT2G21050 78.541 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0038 K13946 - gmx:100778463 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1096 8 12110562 12117440 Pvu10g0038 10 695438 702043 PCT