Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1074 ATGGGCGATTTTAACCTCGCCCTGGTGATCGTGGCGGTGGTGGTCTGCGTGATCGTGTTTCTCGTCAACGTGTACCTCTTGGTCAACTACCAGCATCCCGATGACGCCAACCAGGCCTACTTCCCGAAATTCGTCGTCGTTTTGGGTCTCTCCGTCGCCGCCATCTCCATCCTCATGCTCCCCGCCGACGTGGCGAACCGCCAAGCCTGCCGCCACGCGATCTACAACGGGGCGTGCAACCTCACTCTCCCCATGAAGGAGCTCTGGCTCGCCGTTTACATCCTCGACGCCGTCCTCGTCTTCTTCGTCATCCCATTCGCCATGTTCTACTACGAGGGCGACCTTGACAAGACTGTGGGGAAGAGGGTTAAGAGTGCATTATTGTGGATGGTCACCACGGCTATAGTGTGCGCTCTCGTTCTGGGTATTTTATACGGGCTGGTTGGAAAGGTGGACTTTACTGTCAGGCATCTCTCTTCATCCACAACTGCATTTCCTAACACATGGACATTCAATAGTAATGAACAATGTATTGGAAGTGGTGTCCATCAGTGCTCAGCTTACTCTGCCAGTCCTTCATCAGAGAAAACATGGACCATACGTAGTACCTTCCCAGAATATGTTGTTGCACTTGCTACTATTGTTGGATCTGTGCTTTTTGCTATATTTGGCGGTGTTGGTATTGCTTGTCTTCCATTAGGACTTATATTTTCATTTTTGCGGCGTCCAAAGGCTGTTATCACTCGCTCACAGTATATCAAGGAAGCCACTGAACTAGGTAAAAAAGCAAGAGAATTAAAGAAAGCAGCTGAGGCTCTGCATCAGGAAGAAAAAGGTGGTTCAAAGGGTAGAAAGTTTCGTAAAAATGTGAAGGAAGTCGAGAAGGAGTTGTTTCAATTAGAAGAAGACGTAAAACTTCTTGAAGAGATGTATCCTCAAGGGGAAAAGGCTGAGACAACATGGGCACTAACAGTTCTTAGTTATCTGGCAAAAATTGTTTTCGGAATTTTAGGGTTGATTGTTTCCGTGGTGTGGATCATCCATATTATCATCTACCTATTAATTGATCCACCACTTTCTCCTTTCCTGAATCAAGTTTTCATCAAGCTAGATGATATCTGGGGTCTTTTCGGCACTGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCCGGTGCCATGATGCTTGGACTGAGACTAGTTTTTATTACTATACATCCCATGAAGTGGGGAGCAACTCTTATGAACTCTTTTCTGTTTAATGTGGGCCTTATTCTTCTTTCTTCCATTAGTGTGATCCAGTTCTGCTCCACAGCCTTTGCCTACTACGCTCAAGCTACTGCAGCCCAAGAAATATTTGGCCACACTTTGGAGTCTCTTCGAGGAATTAAATATTTATACAAGTACAATGTATTCCAAATTGCGTTTGTTATTTTAGCTGGATTGACCTTTGTGTATTACGCTGCGTTTGGATGGCGAAGAAAAAAACCTAGTGGCAGGTTCCAATTATCTACATAA 1530 0.4536 MGDFNLALVIVAVVVCVIVFLVNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKELWLAVYILDAVLVFFVIPFAMFYYEGDLDKTVGKRVKSALLWMVTTAIVCALVLGILYGLVGKVDFTVRHLSSSTTAFPNTWTFNSNEQCIGSGVHQCSAYSASPSSEKTWTIRSTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFLRRPKAVITRSQYIKEATELGKKARELKKAAEALHQEEKGGSKGRKFRKNVKEVEKELFQLEEDVKLLEEMYPQGEKAETTWALTVLSYLAKIVFGILGLIVSVVWIIHIIIYLLIDPPLSPFLNQVFIKLDDIWGLFGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLSSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVILAGLTFVYYAAFGWRRKKPSGRFQLST* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1074 509 Coils Coil 256 276 - -
Pvu8g1074 509 Pfam LMBR1-like membrane protein 284 487 IPR006876 -
Pvu8g1074 509 Pfam LMBR1-like membrane protein 9 290 IPR006876 -
Pvu8g1074 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
Pvu8g1074 509 Coils Coil 283 310 - -
Pvu8g1074 509 PANTHER BNAC05G43630D PROTEIN 1 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1074 Pvu-Chr8 11863113 11868802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1074 K14617 - gmx:100816750 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1074 8 11863113 11868802 Pvu8g1074 8 11863113 11868802 ECH
Pvu8g1074 8 11863113 11868802 Pvu10g0013 10 446260 451884 PCT