Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0013 ATGGGAGACTTCAACCTGGCGCTGGTGATTGTGGCGATCGTGGTGTGCGTTATCGTGTTCCTTGTTAACGTGTACCTCCTCGTCAATTACCAGCATCCTGATGATGTTAACCAGGCCTACTTCCCCAAATTCGTCGTCGTTTTGGGTCTCTCCGTCTCCGCCATCTCCATCCTCATGCTTCCCGCCGACGTTGCCAATCGCCAGGCCTGTCGGCACGCGATCTACAATGGCGCGTGCAACCTCACGCTCCCCATGAAGGACCTCTGGCTCGCGGTGTACATCCTCGACGCGCTCCTCGTCTTCTTCGTCATCCCCTTTGCCATGTTCTACTACGAAGGAGACCAGGACAAGAGTGTTGGGAAGCGGATTAAGAGCGCGTTGTGTTGGATGGTGACAACTGCGATTGTGTGCGCTCTTGTTTTGGGGATTCTGTATGGAATTATTGGGAAGGTGGACTTTACTGTTAGACATCTCTCTTCTTCCACAAGCTCATTTCCTAGCACATGGGAATTCAACAGTGGTCAACAATGTATTGGAAACACACATCAGTGTTCTGCATACACTTCCAGTCCTGCATCAGAGAAAACGTGGACCATGCGTACTACCTTTCCAGAATATGTTGTTGCTCTTGCCACTATAGTTGGATCTGTGCTTTTTGCTATATTTGGTGGTGTTGGTATTGCTTGTCTTCCATTGGGACTTATATTTTCATTCATTCGGCGTCCAAAGGCTGTTATCACTCGTTCACAATATATCAAGGAAGCTACTGAACTGGGAAAAAAAGCAAAAGATCTGAAGAAAGCAGCTGAGTCACTTCATCAGGAAGAAAAAAGTGCTTCAAAGGGCAGGAAATTTCGTAAAAATGTGAAATCTGTGGAAAAGGAGTTGCTTCAATTAGAAGAAGATGTCAAGCTTCTTGAAGAGATGTACCCACAAGGAGAAAAGGCTGAGACAACATGGGCACTAACAGTTCTCGGGTATCTGGCTAAACTTGTTTTGGGAGTTTTAGGGTTAATCGTTTCTGTGGCATGGGTTGCTCATATAATTATCTATCTATTAGTTGATCCTCCTCTTTCTCCTTTCTTGAATGTGGTTTTTATCAAGCTGGATGATATCTGGGGTCTTCTAGGTACAGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGAGCCATGGTGGTTGGGCTGAGACTAGTTTTCATTACTATACATCCAATGAAGTGGGGAGCTACTCTCATGAACTCTTTTCTGTTCAATGTGGGGCTTATTCTTCTTTCTTCCATGAGTGTAATCCAGTTCTGCTCCACAGCGTTTGCCTACTATGCTCAAGCAACTGCAGCACAGGAAATATTCGGCCACACCTTCGAATCTCTTCGTGGAATTAAATATTTGTACAAGTACAACGTCTTCCAGATTGCCTTTGTTGCATTGGCTGGGTTGACTTTTGTATATTATGCTGCCTTCGGATGGAGAAGAAAGAAGCCCAGTGGCAGGTTCCAATTGTCTACGTGA 1527 0.4551 MGDFNLALVIVAIVVCVIVFLVNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVSAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDALLVFFVIPFAMFYYEGDQDKSVGKRIKSALCWMVTTAIVCALVLGILYGIIGKVDFTVRHLSSSTSSFPSTWEFNSGQQCIGNTHQCSAYTSSPASEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKDLKKAAESLHQEEKSASKGRKFRKNVKSVEKELLQLEEDVKLLEEMYPQGEKAETTWALTVLGYLAKLVLGVLGLIVSVAWVAHIIIYLLVDPPLSPFLNVVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMVVGLRLVFITIHPMKWGATLMNSFLFNVGLILLSSMSVIQFCSTAFAYYAQATAAQEIFGHTFESLRGIKYLYKYNVFQIAFVALAGLTFVYYAAFGWRRKKPSGRFQLST* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0013 508 Coils Coil 255 275 - -
Pvu10g0013 508 Pfam LMBR1-like membrane protein 9 287 IPR006876 -
Pvu10g0013 508 Pfam LMBR1-like membrane protein 286 486 IPR006876 -
Pvu10g0013 508 Coils Coil 282 309 - -
Pvu10g0013 508 PANTHER BNAC05G43630D PROTEIN 1 507 - -
Pvu10g0013 508 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0013 Pvu-Chr10 446260 451884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0013 K14617 - gmx:100796998 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1074 8 11863113 11868802 Pvu10g0013 10 446260 451884 PCT