Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0932 ATGCAAAAACTCCATCTGGGTCATCTGCACTCCCCCTCAATGGAAACAACACCCTCTTCCACACCTTTCCAAGACCTTACAGAAGCTTCTCCAAAGCCTTCAAAGAAGACAACATTCACCTCTTTCATGACAGCCCCCTCCTTCAAAGAGGACACCTACTTCGTGTCCCACCTCAAACCCTCCGAGAAAAAGGCCCTTCAAGACCTCAGGGACAAACTCAAGGCCTCCTCGGACTCCTCCAACCCCGCTTCGATGTGGGGCGTGCCCCTGCTCGACGGCGGCGACAGAGGCGACGTGCTGCTCCTGAAGTTCCTCCGTGCGAGGGACTTCAGGGTCCACGACGCCCTTAACATGCTCCTCAAGTGCCTCGCGTGGAGGACCGAGTTCGGAGCTGACAACATTGTGGAGGAGGAGCTGGGATTCAAGGAGCTCGAAGGAGTGGTGGCTTACACTCACAGTTACGATAGAGAGGGGCACCCTGTGTGCTACAATGCCTATGGGGTGTTCAAGGATAAGGAGATGTATGAGAGAGTGTTCGGGGATGAGGAGAAGCTGCAGAGGTTCTTAAGGTGGAGGGTTCAGGTTCTGGAGAGAGGGGTGAAGATGCTTCACTTCAAGCCCGGCGGTATCAACTCGCTCATTCAGGTCACTGACCTGAAGGACATGCCCAAGAGAGAACTCAGGGTTGCTTCTAACCAGATACTCTCTCTCTTCCAAGATAACTATCCTGAAATGGTAGCTCGCAAGATTTTCATCAATGTGCCATGGTACTTCAGCGTGTTGTATTCAATGTTCAGTCCGTTTCTGACCCAAAGAACCAAGAGCAAGTTTTTGATCTCTAAGGAGGGAAATGCTGCAGAGACACTCTACAAATTTATAAGGCCAGAGAATATTCCTGTTAGGTATGGTGGATTGAGTCGACCCAGCGATTTGGATAATGGTCCCCCAAAACCTGCTTCTGAGTTCACAGTTAAAGCTGGAGAGAAAGTGAACATACAAATAGAAGGAATAGAGAGTGGTGCAACTATCACATGGGATATTGTGGTGGGAGGCTGGGACCTGGAATATAGTGCTGAATTTGTCCCAATTGCTCAAGGTAGTTACACCTTGGCAGTTGATAAGGCAAGGAAGATTGAGGCCACAGAAGAAGCAATCCACAACTCTTTCACATCAAAAGAAGCTGGCAAAATGGTACTCTCTGTTGATAACTCTGCTTCAAGGAAGAAAAAAGTTGCTGCTTATCGCTATTTTGTGCGCAAATGCAGCAACACGCCATCTTCAGAGCTTCAATTAAGCCCCAAATAA 1305 0.4904 MQKLHLGHLHSPSMETTPSSTPFQDLTEASPKPSKKTTFTSFMTAPSFKEDTYFVSHLKPSEKKALQDLRDKLKASSDSSNPASMWGVPLLDGGDRGDVLLLKFLRARDFRVHDALNMLLKCLAWRTEFGADNIVEEELGFKELEGVVAYTHSYDREGHPVCYNAYGVFKDKEMYERVFGDEEKLQRFLRWRVQVLERGVKMLHFKPGGINSLIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSVLYSMFSPFLTQRTKSKFLISKEGNAAETLYKFIRPENIPVRYGGLSRPSDLDNGPPKPASEFTVKAGEKVNIQIEGIESGATITWDIVVGGWDLEYSAEFVPIAQGSYTLAVDKARKIEATEEAIHNSFTSKEAGKMVLSVDNSASRKKKVAAYRYFVRKCSNTPSSELQLSPK* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0932 434 Gene3D GOLD domain 316 418 - -
Pvu8g0932 434 MobiDBLite consensus disorder prediction 12 38 - -
Pvu8g0932 434 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 321 428 IPR036598 -
Pvu8g0932 434 Gene3D - 130 315 IPR036865 -
Pvu8g0932 434 Gene3D - 55 128 - -
Pvu8g0932 434 SUPERFAMILY CRAL/TRIO domain 142 307 IPR036865 -
Pvu8g0932 434 ProSiteProfiles GOLD domain profile. 286 420 IPR009038 -
Pvu8g0932 434 SUPERFAMILY CRAL/TRIO N-terminal domain 38 138 IPR036273 -
Pvu8g0932 434 MobiDBLite consensus disorder prediction 1 38 - -
Pvu8g0932 434 PANTHER PATELLIN-6 19 422 - -
Pvu8g0932 434 SMART CRAL_TRIO_N_2 97 122 IPR011074 -
Pvu8g0932 434 PANTHER PATELLIN-1 19 422 IPR044834 GO:0008289
Pvu8g0932 434 Pfam CRAL/TRIO domain 145 304 IPR001251 -
Pvu8g0932 434 Pfam CRAL/TRIO, N-terminal domain 65 120 IPR011074 -
Pvu8g0932 434 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 136 310 IPR001251 -
Pvu8g0932 434 SMART sec14_4 143 307 IPR001251 -
Pvu8g0932 434 CDD SEC14 141 305 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0932 Pvu-Chr8 9306702 9309904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0932 101 314 Acyl Lipid Metabolism Gene Families AT1G55840 28.448 1.87e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0932 - - gmx:100814996 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0932 8 9306702 9309904 Pvu8g0932 8 9306702 9309904 ECH
Pvu8g0932 8 9306702 9309904 Pvu10g0657 10 11425346 11428666 PCT