Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0657 ATGATGGACACCGCTTCATCCCCTTTGTCTCTCCAAAGCCAAAAGACAAGCTTCCAGGACTTGCCAGAAGCTTCCCCCAAGCCTTACAAGAAGGGCTTTGTGGCCACCCTAATGGGAGGAGTCTCTACTACTCCTTCCTTCAAAGAAGATAACTACTTTGTCTCCCTCCTCAGGTCCTCAGAGAAGAAAGCGCTTCAGGAGCTGAAGGACAAGCTCAAAGCGTCCTTTGATGACTCTCCCTCTGATGCCTCCATGTGGGGCATTCCCCTCCTTGGAGGTGATGACAAAGCTGATGTTATTCTCCTGAAGTTTCTTAGAGCAAGGGACTTCAGGGTTGGTGATGCCCTACACATGCTTCTAAGGTGTCTTGCTTGGAGGAAGGAGTTTGGTGCCGACACCATTTTGGAAGAGGATTTGGGGTTCAAGGAGCTTGAAGGAGTGATAGCATATATGCAAGGGTATGACAAAGAGGGGCACCCTGTGTGCTACAATGCGTATGGGGTGTTTAAGGACAAGGAAATGTATGAGAGGGTCTTTGGTGACGACGAGAAGCTGAAAAAATTCCTCAGGTGGAGGGTTCAAGTCCTTGAGAGAGGCATCAAGGTTCTTCATTTCAAGCCTGGTGGGGTCAATTCTCTCATTCAGGTCACAGACCTCAAGGACATGCCCAAGAGAGAGCTTAGGGTGGCTTCCAACCACATTCTCTCCTTGTTCCAAGACAACTACCCGGAAATGGTGGCTCGCAAGGTTTTCATCAACGTGCCGTGGTACTTCAGCATGCTGTATTCAATGTTCAGTCCGTTTCTGACTCAGAGAACTAAGAGCAAGTTTGTGATCTCCAAGGAAGGAAATGCTGCAGAGACACTCTACAAATTTATTAGGCCTGAGGATATTCCTGTTCAGTATGGAGGACTGAATCGGCCCAGTGATTTGCCGAATGGTCCCCCAAAACCTGCATCTGAGTTCACAATCAAAGGAGGGGAGAAAGTGAACATACAAATTGAAGGAATTGAGGCTGGTGCAACAATCACATGGGACATTGTAGTGGGAGGATGGGACTTGGAATACAGTGCTGAATTTGTGCCAAATGCTGAAGGAAGCTACACCATAGCAGTTGAAAAGGCAAGGAAGATGGGAGCCTCAGAAGAAGCAATCCACAACTCATTCACATCAAAAGAATCTGGAAAGATGGTACTCTCAGTTGATAACACTGCCTCAAGGAGGAAAAAGGTTGCTGCTTATCGCTATGTTGTCCGCAAAAGCAGCACCATTTAA 1275 0.4745 MMDTASSPLSLQSQKTSFQDLPEASPKPYKKGFVATLMGGVSTTPSFKEDNYFVSLLRSSEKKALQELKDKLKASFDDSPSDASMWGIPLLGGDDKADVILLKFLRARDFRVGDALHMLLRCLAWRKEFGADTILEEDLGFKELEGVIAYMQGYDKEGHPVCYNAYGVFKDKEMYERVFGDDEKLKKFLRWRVQVLERGIKVLHFKPGGVNSLIQVTDLKDMPKRELRVASNHILSLFQDNYPEMVARKVFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLNRPSDLPNGPPKPASEFTIKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKARKMGASEEAIHNSFTSKESGKMVLSVDNTASRRKKVAAYRYVVRKSSTI* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0657 424 Pfam CRAL/TRIO domain 145 304 IPR001251 -
Pvu10g0657 424 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 321 420 IPR036598 -
Pvu10g0657 424 ProSiteProfiles GOLD domain profile. 286 420 IPR009038 -
Pvu10g0657 424 Gene3D - 55 128 - -
Pvu10g0657 424 Gene3D GOLD domain 317 418 - -
Pvu10g0657 424 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 136 310 IPR001251 -
Pvu10g0657 424 PANTHER PATELLIN-6 15 422 - -
Pvu10g0657 424 Pfam CRAL/TRIO, N-terminal domain 65 119 IPR011074 -
Pvu10g0657 424 SMART CRAL_TRIO_N_2 97 122 IPR011074 -
Pvu10g0657 424 SMART sec14_4 143 307 IPR001251 -
Pvu10g0657 424 Gene3D - 132 316 IPR036865 -
Pvu10g0657 424 SUPERFAMILY CRAL/TRIO N-terminal domain 59 138 IPR036273 -
Pvu10g0657 424 MobiDBLite consensus disorder prediction 1 21 - -
Pvu10g0657 424 MobiDBLite consensus disorder prediction 1 27 - -
Pvu10g0657 424 SUPERFAMILY CRAL/TRIO domain 142 307 IPR036865 -
Pvu10g0657 424 CDD SEC14 141 305 IPR001251 -
Pvu10g0657 424 PANTHER PATELLIN-1 15 422 IPR044834 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0657 Pvu-Chr10 11425346 11428666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0657 101 299 Acyl Lipid Metabolism Gene Families AT1G55840 27.700 7.28e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0657 - - gmx:100809944 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0932 8 9306702 9309904 Pvu10g0657 10 11425346 11428666 PCT