Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0852 ATGAGAAGCAGTGAAGGTGAGGAAGGAACAAGAAACAGTGGTTGTGGCAGGTTTCTTCATGACCTTCCTCAACAGTTTCACAACCTTCTCAAAGAACTTTTTCCTACCCTTTCTCTCTCTGAGGTAAAAGAAGAGTTTAAATCACTGGCGAACATTGCATGTCCAATAATGGTGACCAACGTGCTTTTGTACTCACGATCTGCCATTTCCATGCTTTTCTTGGGTCGACAAGGGAAAGTTGAGCTCGCTGGAGGAGCACTTGCAATAGGGTTTACCAACATCACTGCAAATTCATTTCTCAAGGGTCTCACCATGGGAATGGACCCAATTTGTTGCCAAGCATATGGAGCAAAAAGATGGTCAGTTCTAAGCCAAACCTTTTGCAAAACCTTTTGTCTTCTCTTCCTTGTTGCCATTCCCATTTCACTACTATGGCTAAACATGGCACCCCTCCTTCGGTGGCTAGGACAAGACCCTGAAGTCACAAAGGTTGCACAAGCTTACATGCTCTTCTCTATCCCTGAATTGCTTGCCCAAGTTCATCTCAATCCATTGAGGTCTTTCTTGAGAACACAAGGCTTAACAGCTCCACTAACTGTAGCTGCCACTTTTGCTGCCATTTTACACCTTCCAATAAATTACTTCTTTGCTACATATTTGAAGTTGGGAGTGAAAGGCATTGCATTAGCCACAGGTTTCAACTCAATAAACATGATCCTAGGCTTAGTGCTTTATCTTCTTGTGTCAGAGAAACCTCTAAAACCTTGGGAAGGTGCCACTATTCTCTCTTCCTTTCGTGATTGGAGACCATTGCTAAGTCTAGCATTGCCAAGCTGCATCTCAGTGTGCTTGGAGTGGTGGTGTTATGAGATAATGCTCTTCCTATGTGGGTTGTTGAGTAATCCACAAACCACAGTTGCTACCATGGGTGTCCTAATTCAAACAACTGGGTTCCTATATGTATTCCCATTTTCATTGAGTGCTGCCTTGACAACACAAATTGGTCACTCACTAGGAGCAGGGCAACCCTCACGTGCACAAAGTACAGCCACAATAGGACTTTTCTTAGCATTTGCATCTGGGGTCTCAGCCTTTGTTTTCTTGATGTTTGTGAGGAAAGTGTGGGGGAAACTCTTCACAACTGAGACACAAATTGTGGATATGGTCACAACCATACTTCCAATTTTGGGATTGTGTGAGATTGGTAACTGGCCTCAAACTGCTGCATGTGGGATCTTATCAGGAACTGCACGCCCTTATGTGGGTGCAAGAATAAACCTGTGTGCATTTTACTTAATAGGGTTGCCAGTTGCAATTTTTGCTGCTTTCATGCACAGATGCCAATTGAGGGGTTTGTGGTTTGGCATGTTGGCTGCACAGATTTCGTGTTTCTGCATGATGGTGTACACCTTGATTCAAACTGATTGGGGGCATCAAAGTAAACGAGCTGAGCAACTAGCTCGAAGAAGAGATGATGAGGAAAATGTAAATGATAATGACGAATGTGAACTCCTTAATTCTGATTTATGA 1530 0.434 MRSSEGEEGTRNSGCGRFLHDLPQQFHNLLKELFPTLSLSEVKEEFKSLANIACPIMVTNVLLYSRSAISMLFLGRQGKVELAGGALAIGFTNITANSFLKGLTMGMDPICCQAYGAKRWSVLSQTFCKTFCLLFLVAIPISLLWLNMAPLLRWLGQDPEVTKVAQAYMLFSIPELLAQVHLNPLRSFLRTQGLTAPLTVAATFAAILHLPINYFFATYLKLGVKGIALATGFNSINMILGLVLYLLVSEKPLKPWEGATILSSFRDWRPLLSLALPSCISVCLEWWCYEIMLFLCGLLSNPQTTVATMGVLIQTTGFLYVFPFSLSAALTTQIGHSLGAGQPSRAQSTATIGLFLAFASGVSAFVFLMFVRKVWGKLFTTETQIVDMVTTILPILGLCEIGNWPQTAACGILSGTARPYVGARINLCAFYLIGLPVAIFAAFMHRCQLRGLWFGMLAAQISCFCMMVYTLIQTDWGHQSKRAEQLARRRDDEENVNDNDECELLNSDL* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0852 509 PANTHER MULTIDRUG RESISTANCE PROTEIN 30 493 - -
Pvu8g0852 509 TIGRFAM matE: MATE efflux family protein 55 453 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu8g0852 509 PANTHER PROTEIN DETOXIFICATION 53 30 493 - -
Pvu8g0852 509 Pfam MatE 277 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu8g0852 509 Pfam MatE 55 215 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu8g0852 509 Coils Coil 483 503 - -
Pvu8g0852 509 CDD MATE_eukaryotic 45 482 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0852 Pvu-Chr8 8109572 8115713 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0852 K03327 - gmx:100816717 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0852 8 8109572 8115713 Pvu10g0709 10 17138649 17144933 PCT