Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0709 ATGTGCACTGGTGCTGAATCTCGAGGAAATATAAATGGTGAGCCTGTGATTCCAAAGGTGGGAGAAGACTATGAGGGTAATACAATGAGAACCATAGAAGGTGGAGAAAGAGCTTGCAACTGTGGAACATTTTTTCAAGGTCTTCTTCAACGCCTTCATCACCTTCTCACTGCCCTTAATCTTCATATTTCTGCTTCTGAGTTGAAAGAAGAGTTGCAATCTCTTGCAAAGGTTGCATGTCCCATAATAATGACTAGCTTAATGATGTACTCTCGATCTGCTGTGTCCATATTGTTTTTGGGTCGGCAAGGGAAAGTAGAGCTAGCAGGAGGCTCACTGGCACTTGGATTTGCCAACATAACTGCAAATTCAGTTCTCAAAGGCCTCACAATGGGAATGGACCCAATTTGTTGCCAAGCTTTTGGAGCAAAGAGATGGTCAGTTCTCAACCAAACCTTTTTCAGAACTATATGTCTCCTCCTACTTGTTGCCATACCCATTTCAATTTTATGGCTAAACATGGAACCCATCCTTCAAATGCTAGGTCAAGACCCGGAAGTCACAAAAGTTGCCCAAGTTTATATGGTTTTCTCTATTCCAGAGTTGCTAGCTCAAGCTCATCTTAACCCATTGAGGTCCTTCTTAAGAACCCAAGGCTTAACCACCCCAGTCACTATAGCTGCATCTTGTGCAGCACTCTTGCACCTTCCCATCAACTATTTCTTGGCCACATACTTGAACTTAGGGGTAAAGGGTATTGCTTTAGCCACTGGTTTGAACTCTATAAACATGACTTTAGGCTTGCTGCTCTATGTTTTCTTCTCAAATAAACCACTAAAACCCTGGGAAGGAGCAACTATTCTCTCAGCCTTTCATGGGTGGAAACCATTGCTGAGTTTGGCACTGCCTAGTTGCATTTCAGTGTGCTTGGAGTGGTGGTGGTATGAGATAATGCTCTTTCTATGTGGATTGTTGAGCAATCCACAAGCTACCATTGCTACCATGGGGATCCTTATTCAAACACTTGGCTTCTTGTATGTATTCCCGTTTTCCCTAAGTATAGCCTTGACAACAAGAATTGGTCACTCCTTAGGTGCAGGGCACGCATCCAAGGCCCAAAGTACAGCCATAATTGGGTTCATGGCAGCATTTACTTCGGGGATCGCTGCCTTCATTTTGTTGTTTTTTGTGAGGAAATCATGGGGGAAACTTTTCACTGATGAGACACAAATTATTGATCTGGTCACAACTATACTTCCCATTCTTGGGCTGTGTGAGATTAGCAATTGGCCTCAAACAGTTTCATGTGGGATTTTGTCAGGGACTGCTAGGCCTTATCTGGGTGCTAGAATAAACTTGTGTGCATTCTACCTAGTAGGATTGCCAGTTTCTGTTTTTGCCACTTTCATATACAAGTATGAATTGGTGGGTTTGTGGTCTGGAATGGTTGCTGCACAGGCTTCTTGTCTTTGCATGATGGTCTACACATTGATTCAAACAGATTGGGGGCAGCAATGTAAGAGGGCAGTGGAACTAGCTCAGAAAACAACAGAGCAGGAAAATAAAAATGATGAGGAAAGTGGGTTACTTGGTTCTGATCAATAA 1605 0.4305 MCTGAESRGNINGEPVIPKVGEDYEGNTMRTIEGGERACNCGTFFQGLLQRLHHLLTALNLHISASELKEELQSLAKVACPIIMTSLMMYSRSAVSILFLGRQGKVELAGGSLALGFANITANSVLKGLTMGMDPICCQAFGAKRWSVLNQTFFRTICLLLLVAIPISILWLNMEPILQMLGQDPEVTKVAQVYMVFSIPELLAQAHLNPLRSFLRTQGLTTPVTIAASCAALLHLPINYFLATYLNLGVKGIALATGLNSINMTLGLLLYVFFSNKPLKPWEGATILSAFHGWKPLLSLALPSCISVCLEWWWYEIMLFLCGLLSNPQATIATMGILIQTLGFLYVFPFSLSIALTTRIGHSLGAGHASKAQSTAIIGFMAAFTSGIAAFILLFFVRKSWGKLFTDETQIIDLVTTILPILGLCEISNWPQTVSCGILSGTARPYLGARINLCAFYLVGLPVSVFATFIYKYELVGLWSGMVAAQASCLCMMVYTLIQTDWGQQCKRAVELAQKTTEQENKNDEESGLLGSDQ* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0709 534 TIGRFAM matE: MATE efflux family protein 81 479 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu10g0709 534 PANTHER PROTEIN DETOXIFICATION 53 55 519 - -
Pvu10g0709 534 Pfam MatE 81 241 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu10g0709 534 Pfam MatE 303 465 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu10g0709 534 PANTHER MULTIDRUG RESISTANCE PROTEIN 55 519 - -
Pvu10g0709 534 CDD MATE_eukaryotic 71 508 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0709 Pvu-Chr10 17138649 17144933 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0709 K03327 - gmx:106798137 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0852 8 8109572 8115713 Pvu10g0709 10 17138649 17144933 PCT