Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0836 ATGGGCACAAAACTGAGTCTGTTGTTGTGTGTTTGGGTTTTGCTATTGGAGTGTACTGTGGGTAGGTTTGTGGTGGAGAAGAACAGTTTGAGAGTGACTGCACCCACATCGTTGAAGGGGACATATGAATGTGCAATTGGAAATTTTGGGGTTCCCAAGTATGGAGGAACATTGGTTGGTTCTGTGGTATACCCAAAGGTGAATCAGAAGGGGTGCCTCAACTTCACTGATGTCAATTTTCAGTCCAAGCCAGGAGTGTTCCCCACTTTTCTTCTTGTGGATCGTGGAGATTGCTACTTCACTTTGAAGGCATGGAATGCACAGAATGGTGGAGCAGCAGCTATTCTTGTAGCTGATGACAAGGCAGAAACATTGATCACTATGGACACTCCTGAAGAAGGGAAAGGTACAAATGATGATTATGTGGACAATATTAGTATTCCTTCTGCTCTTATCAGCAAATCCTTCGGGGATAGCATCAAGAAAGCTCTCTCTGATGGGGACATGGTTAACATGAATCTTGATTGGAGAGAGGCTCTTCCGCATCCAGATGATAGAGTTGAGTATGAGTTATGGACAAATAGCAATGACGAGTGTGGGCCAAAGTGTGACAGTCTAATTAATTTTCTGAAGGACTTTAAAGGGGTAGCTCAGCTGCTCGAGCAGAACGGGTTCACTCAGTTTACACCTCGCTATATAACTTGGTTTTGTCCTGAAGCATTTCTCTTGAGCAAACAGTGCAAGTCTCAATGCATAAACAATGGAAGGTACTGTGCTCCAGATCCCGAGCAAGATTTCAGTAGAGGGTATGATGGCAAAGATGTTGTTGTTCAAAACTTACGCCAAGCTTGCTTCTATAAAGTGGCAAATGAAAGTGGAAGGCCCTGGAAGTGGTGGGACTATGTTACCGACTTTTCAATTCGTTGCCCCATGAAAGAGAACAAGTACACAGAAGAATGCTCAGATGAAGTTATTAAATCTCTTGGTGCTGATCTGAAGAAGATTAAGGACTGTGTTGGTGATCCCCATGCAGATGTTGAAAATGCTGTTCTTAAGGCTGAGCAGGATGCCCAGATTGGCAAAGGCACTCGTGGTGATGTCACAATACTGCCTACTCTTATTATAAACGACAGACAGTATAGAGGTAAGTTGTCAAGACCCGCTGTTCTCAAGGCACTCTGTGCAGGTTTCCTAGAGACCACTGAACCATCAGTTTGCTTAACTCAAGAAATGGAAACAAACGAGTGTTTGGTAAACAATGGTGGTTGTTGGAAGGAAAAATCCTCTAACATTACTGCTTGCAGGGACACTTTCCGAGGAAGAGTATGTGAATGCCCTATAGTACAAAGTGTGAAATTTGTTGGAGATGGATATACCCACTGTGAAGCATCGGGAACCTTGAGCTGTGACTTCAACAATGGTGGTTGTTGGAAGGGATCTCAAGGTGGCAAGGCTTACACGGCTTGTCTGGATGACTACAGAAAAGGCTGTACATGTCCTCCTGGGTTCAGAGGTGATGGAGTAAAGTCATGTGAAGATATTGATGAGTGCCAAGAGAAAACAGCCTGCCAATGCCCAAGTTGCAAATGTAAAAACACCTGGGGAAGTTATGAGTGCAAATGCGGTAGTGGTTTGTTCTACTCACGAGAAAATGACACATGTCTAGGAGCATATTCTGCTTCAGGGGTGAGCATCTGGATGATTATGCTCATCGTGGTTGTTGCTGTTTCTGGAGGATATGCATTTTACAAGTACAGAATCCAGAGATACATGGATTCAGAAATACGAGCAATTATGGCACAATACATGCCTTTGGATAATCAACCTGATGTCCCTAATCAAGTTCATCACAACATCTAG 1860 0.4366 MGTKLSLLLCVWVLLLECTVGRFVVEKNSLRVTAPTSLKGTYECAIGNFGVPKYGGTLVGSVVYPKVNQKGCLNFTDVNFQSKPGVFPTFLLVDRGDCYFTLKAWNAQNGGAAAILVADDKAETLITMDTPEEGKGTNDDYVDNISIPSALISKSFGDSIKKALSDGDMVNMNLDWREALPHPDDRVEYELWTNSNDECGPKCDSLINFLKDFKGVAQLLEQNGFTQFTPRYITWFCPEAFLLSKQCKSQCINNGRYCAPDPEQDFSRGYDGKDVVVQNLRQACFYKVANESGRPWKWWDYVTDFSIRCPMKENKYTEECSDEVIKSLGADLKKIKDCVGDPHADVENAVLKAEQDAQIGKGTRGDVTILPTLIINDRQYRGKLSRPAVLKALCAGFLETTEPSVCLTQEMETNECLVNNGGCWKEKSSNITACRDTFRGRVCECPIVQSVKFVGDGYTHCEASGTLSCDFNNGGCWKGSQGGKAYTACLDDYRKGCTCPPGFRGDGVKSCEDIDECQEKTACQCPSCKCKNTWGSYECKCGSGLFYSRENDTCLGAYSASGVSIWMIMLIVVVAVSGGYAFYKYRIQRYMDSEIRAIMAQYMPLDNQPDVPNQVHHNI* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0836 619 Pfam Complement Clr-like EGF-like 497 516 IPR026823 -
Pvu8g0836 619 Pfam PA domain 60 160 IPR003137 -
Pvu8g0836 619 Gene3D Laminin 467 551 - -
Pvu8g0836 619 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 9 598 - -
Pvu8g0836 619 Gene3D Laminin 406 451 - -
Pvu8g0836 619 ProSitePatterns Calcium-binding EGF-like domain signature. 513 539 IPR018097 GO:0005509
Pvu8g0836 619 Gene3D - 20 183 - -
Pvu8g0836 619 SMART egfca_6 513 555 IPR001881 GO:0005509
Pvu8g0836 619 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 9 598 - -
Pvu8g0836 619 SUPERFAMILY PA domain 90 169 IPR046450 -
Pvu8g0836 619 CDD EGF_CA 513 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0836 Pvu-Chr8 7917295 7922966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0836 4 619 Miscellaneous Gene Families AT3G52850 69.984 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0836 - - gmx:100807514 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0836 8 7917295 7922966 Pvu8g0836 8 7917295 7922966 ECH
Pvu8g0836 8 7917295 7922966 Pvu10g0592 10 9510696 9516379 PCT