Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0592 ATGATGACAATGAGGACAAAGCAAAGTTTTTTGTGGTGTGTATGGATTTTGCTTTGTGGGTCTTGTGTTGGAACGTTTGTGGTGGAGAAGAACAATTTGAAAATCACTTCTCCAAATTCATTGAAAGGTATATATGAATGTGCAATTGGGAATTTTGGGGTCCCTAAGTATGGAGGAACCATGATTGGCTCAGTGGTGTACCCCAAGACCGATCAGAATGGATGTAAACCCTTTGATTCCTCGTTGAGTTCCAAGCCCGGAACCTTCCCCAGCTTTGTTCTTATTGATCGAGGAGAGTGCTTCTTCACTTTGAAGGCGTGGAATGCACAGAAAGGTGGAGCAGCGGCCATTCTTGTCGCAGATGATAGGACAGAACCATTGATCACCATGGACACACCTGAAGAAGGAAATGGTGCCAGCAATGACGATTATATTGAGAAGATCAGCATTCCTTCTGCCCTTATCAGCAAATCACTAGGTGATAAAATCAAGAGTGCTCTCTCTAGTGGGGAAATGGTTAATGTAAATCTTGATTGGAGAGAGGCTCTTCCTCACCCTGATGAGAGAGTTGAGTATGAGTTTTGGACAAGTAGCAATGATGAGTGTGGACCAAAGTGTGAAAGTGAAATCAACTTTGTCAGGGGTTTTAAAGGGGCAGCTCAATTACTAGAGCAGAAAGGGTTTGCAAAGTTTACCCCTCACTATATAACTTGGTATTGTCCAGAAGCATTTATACTGAGCCAACAGTGCAAGTCCCAGTGCATAAATAATGGGAGATACTGTGCACCAGATCCTGAGCTAGATTACAAGAGAGGGTACAGTGGTAGAGATGTTGTTATCCAAAACTTACGTCAAGTATGCTTCTTTAAAGTGGCAAATGAAAGTGGAAAGCCTTGGCAATGGTGGGACTACGTCACTGACTTTTCAATCCGCTGCCCAATGAGAGAGAATAAGTATACTGAAGAATGCTCAGATCAAGTTATCAAATCTCTTGGAGTTGATTTGAAGAAAGTTAAAGATTGTGTTGGAGATCCTACTTCGAATCTGGATAACCCTGTTCTCAATAATGAACAGGACTCACAGATTGGTAACGGCGATCGTGGAGATGTTACTATACTACCTACTCTTATTATAAACAACAGACAATATAGAGGTAAGCTGTCAAAAGCAGCAGTACTGAAGGCAATCTGTTCAGGTTTCCAAGAGACTACCGAGCCATCAATTTGTTTAACTCCAGACATGGAAACTAATGAGTGTTTGCAAAACAATGGTGGTTGTTGGCAGGACAATGCTGCTAACATTACTGCGTGCAGGGACACTTTCAGAGGAAGAATATGTGAATGCCCAGTTGTACAAAATGTCCAGTTTGTTGGTGATGGATATACCCATTGTGAAGCTACAGGCGCCTTGAGGTGTGCAATCAACAATGGAGGTTGTTGGAAAGAAACCCAAGGTCGCACAACTTTCTCTGCTTGTATTGACGACCACACCAAAGGTTGCAAGTGTCCACCTGGATTCAGGGGAGATGGAGTCAACTCCTGTAAAGATGTGGACGAATGCTCGGAGAAATTGGCCTGCCAGTGCCCAGAGTGTCATTGCAGAAATACTTGGGGAAGTTATGAATGCTCATGTAGTGATGGTTTGTTCTACACGCGAGAAAATGATATGTGCATTGGAAAATATGCTGCTTCAGTGGCCGGTGGGGGCATTGTTTGGATGGTTCTTCTGATCTTGGTTGTTGCTGGTGCTGGAGGGTATGCATTTTACAAATACAGAATCCGGAGATACATGGACTCTGAGATAAGGGCAATTATGGCCCAATATATGCCCTTGGATAATCAACCGGAGACTTCTACTCAAACTCATGAAGATGTCTAG 1878 0.4313 MMTMRTKQSFLWCVWILLCGSCVGTFVVEKNNLKITSPNSLKGIYECAIGNFGVPKYGGTMIGSVVYPKTDQNGCKPFDSSLSSKPGTFPSFVLIDRGECFFTLKAWNAQKGGAAAILVADDRTEPLITMDTPEEGNGASNDDYIEKISIPSALISKSLGDKIKSALSSGEMVNVNLDWREALPHPDERVEYEFWTSSNDECGPKCESEINFVRGFKGAAQLLEQKGFAKFTPHYITWYCPEAFILSQQCKSQCINNGRYCAPDPELDYKRGYSGRDVVIQNLRQVCFFKVANESGKPWQWWDYVTDFSIRCPMRENKYTEECSDQVIKSLGVDLKKVKDCVGDPTSNLDNPVLNNEQDSQIGNGDRGDVTILPTLIINNRQYRGKLSKAAVLKAICSGFQETTEPSICLTPDMETNECLQNNGGCWQDNAANITACRDTFRGRICECPVVQNVQFVGDGYTHCEATGALRCAINNGGCWKETQGRTTFSACIDDHTKGCKCPPGFRGDGVNSCKDVDECSEKLACQCPECHCRNTWGSYECSCSDGLFYTRENDMCIGKYAASVAGGGIVWMVLLILVVAGAGGYAFYKYRIRRYMDSEIRAIMAQYMPLDNQPETSTQTHEDV* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0592 625 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 13 604 - -
Pvu10g0592 625 SUPERFAMILY PA domain 92 173 IPR046450 -
Pvu10g0592 625 Gene3D Laminin 410 457 - -
Pvu10g0592 625 CDD EGF_CA 516 547 - -
Pvu10g0592 625 SMART egfca_6 516 558 IPR001881 GO:0005509
Pvu10g0592 625 Pfam PA domain 63 163 IPR003137 -
Pvu10g0592 625 ProSitePatterns Calcium-binding EGF-like domain signature. 516 542 IPR018097 GO:0005509
Pvu10g0592 625 Gene3D - 23 186 - -
Pvu10g0592 625 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 13 604 - -
Pvu10g0592 625 Gene3D Laminin 469 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0592 Pvu-Chr10 9510696 9516379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0592 15 625 Miscellaneous Gene Families AT3G52850 68.831 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0592 - - gmx:100815266 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0836 8 7917295 7922966 Pvu10g0592 10 9510696 9516379 PCT