Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0825 ATGGAGATATTTGGTGTTCGCATTATTTCTTTGGTACTTTTCTTGGTGCTTACTAAAAATTTAAGTTCCAATGCTTTTGGAGGGAGTATGAAGGATGAGGAAGCACTCATGGAAGGCAACAATGAAATGGAAAATTCTATCTCAAATTATGGAGAAATGAGGGGCGTGAAAGATGATGATTGGCAGATGGTGCAAAAGAAGGGAAACCAATTTGTGGTGAATGACAAACCTTTCTATGTCAATGGATTCAACACATATTGGCTTATGGTATTTGCTGCAGATGAGTCCACCAGAGGAAAGGTCACTGAGGTGTTCAAGCAGGCATCCTCAGTGGGTATGACAGTTTGTAGGACATGGGCCTTCAATGATGGCCAATGGCGTGCCCTACAGAAATCTCCATCAGTTTATGATGAAGAAGTCTTCAAGGCCCTGGACTTTGTGGTAAGTGAAGCAAAGAAATACAAAATCAGGCTTATATTATCATTGACTAACAACTGGGAGGCATATGGAGGCAAAGCGCAATATGTGAAATGGGGCAATGCTGCTGGCCTTAACTTGACCTCTGATGATGACTTCTTCTCACATCCAACTCTTAGAAGCTACTACAAGTCCCATGTTAAGACTGTGCTCAATAGAGTTAACACATTCACAAACATCACTTACAAGGAGGATCCAACAATTTTTGCTTGGGAATTGATGAATGAGCCTCGTTGCACCTCAGATCCCACAGGTGACAAGTTACAGGACTGGATTCAAGAAATGGCATTCCAAGTGAAGAAAATTGATCCAAAACACCTAGTAGAGGTTGGACTAGAAGGATTTTATGGCCCATCAACACCTCAGAGAACTCAGTTCAATCCCAATACATATGCTACACAGGTTGGAACTGATTTTATAAGAAACCACCAGGCTCTTGGTGTGGACTTCGCTTCTGTTCATATATATGCTGACTCTTGGATTTCACAACAAATTGCTGATTCTCATCTCTCATTTATAAAATCATGGATGGAAGCCCATATAGAGGATGCTGAAAAGCATCTTGGAATGCCAGTTGTTTTTGCTGAGTTTGGTGTATCTTCCAAAGACCCTGGCTACAATTCATCATACCGAGATACAGTCATAAGTAGTGTGTACAATACCATCCTAAACTCCACAAAGAAAGGAGGGAGTGGGGCTGGAAGCCTTTTGTGGCAATTTTTTCCTGATGGAACTGATAACATGGATGATGGGTATGCAATTGTTCTCTCAAAATCTCCTTCCACCTCAAGCATCATACAACTTCAATCCACTAGACTTGCTCTGTTCAATTCCTTGTGCAATACTAAATGCAATTGGGGATGTAAGAAGAAAAAGTTGTTGAACAAAATACTCTATCACGATGAACTGTAA 1389 0.4082 MEIFGVRIISLVLFLVLTKNLSSNAFGGSMKDEEALMEGNNEMENSISNYGEMRGVKDDDWQMVQKKGNQFVVNDKPFYVNGFNTYWLMVFAADESTRGKVTEVFKQASSVGMTVCRTWAFNDGQWRALQKSPSVYDEEVFKALDFVVSEAKKYKIRLILSLTNNWEAYGGKAQYVKWGNAAGLNLTSDDDFFSHPTLRSYYKSHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDPTGDKLQDWIQEMAFQVKKIDPKHLVEVGLEGFYGPSTPQRTQFNPNTYATQVGTDFIRNHQALGVDFASVHIYADSWISQQIADSHLSFIKSWMEAHIEDAEKHLGMPVVFAEFGVSSKDPGYNSSYRDTVISSVYNTILNSTKKGGSGAGSLLWQFFPDGTDNMDDGYAIVLSKSPSTSSIIQLQSTRLALFNSLCNTKCNWGCKKKKLLNKILYHDEL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0825 462 SUPERFAMILY (Trans)glycosidases 63 419 IPR017853 -
Pvu8g0825 462 PANTHER - 8 462 IPR045053 GO:0004553
Pvu8g0825 462 Gene3D Glycosidases 61 435 - -
Pvu8g0825 462 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 8 462 - -
Pvu8g0825 462 Pfam Cellulase (glycosyl hydrolase family 5) 74 373 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0825 Pvu-Chr8 7802705 7805479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0825 4 462 Glycoside Hydrolase AT5G01930 67.316 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0825 K19355 - gmx:100811794 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0825 8 7802705 7805479 Pvu8g0825 8 7802705 7805479 ECH
Pvu8g0825 8 7802705 7805479 Pvu10g0603 10 9674430 9677918 PCT