Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0603 ATGGACTCAACACACAGAAACAGTGAATATGAAGATGGGGAAAGCGTTGATATAGCAGATTCTTTCTTAAGTTATGGAAATGAAATGGAAGACATGGAAGAAAATGAATGGCAGATGGTGCAAACTAAAGGAAACCAATTTGTGGTGAATGACCAACCTTTCTATGTTAATGGATTCAACACGTACTGGTTGATGGTATTTGCTGCAGATGAGTCTACCAGAGGAAAGGTCACTGAGGTGTTCAAACATGCATCGTCTGTGGGCATGTCAGTTTGTAGGACTTGGGCCTTCAATGATGGCCAATGGCGCGCTCTTCAGAAATCTCCATCAGTATATGATGAAGACGTGTTCAAGGCCTTGGATTTTGTGGTAAGTGAAGCAAAGAAATATAAAATTAGGCTCATATTATCACTGGTTAACAACTGGGAGGCTTATGGGGGCAAAGCACAGTATGTGAAATGGGGCAATGCAGCTGGCCTTAACTTGACCTCTGATGATGACTTTTTTTCACATCCAACTCTCAGAAGCTATTACCAGGCTCATGTTAAGACGGTGCTCAATAGAGTTAATACATTCACAAATATCACTTACAAGGAAGATCCAACCATTTTTGCTTGGGAACTGATGAATGAGCCTCGGTGCACCTCAGACTCCTCAGGTGATGTGTTACAGGATTGGATAAAAGAAATGGCATTCTATGTGAAAAGCATTGATACAAAACATCTAGTGGAGATTGGACTGGAAGGATTTTATGGCCCGTCAACACCTCAGAGATATCAGTTAAACCCAAATGCATTTGCTCAACAGGTCGGAACTGATTTTATCAGGAACCACCAGGTTCTAGGTGTTGACTTCGCTTCTGTTCACATATATCCAGACTCTTGGATTTCACAATCAATTGCTGATTCCCACCTCCCATTTATAAAGTCTTGGATGGAAGCTCACATAGAGGATGCAGAAAAGTATCTTGGAATGCCTGTTGTTTTTGGTGAGTTTGGTGTGTCTGCAAAAGCTCCTGGCTTCAATTCATCATACAGAGACAACCTTGTAAACACTGTGTACAAGACAATCCTAAACTCTACCAAGAAAGGAGGTAGTGGTGCTGGAAGCCTTGTGTGGCAGCTCTTTCCCGATGGAACGGATTACATGGATGATGGGTATGCAATTGTTCTCTCAAAATCACCTTCCACATCAAGCATTATATCCCTTCAATCCACAAGGCTAGCCCTCTTCAATTCCTTGTGCTCTAAGAAATGCCGTTGGGGTTGTAAGAAGCGAAATGTGTTGGAAAAAGTACTCTATCATGACGAACTCTAA 1317 0.4191 MDSTHRNSEYEDGESVDIADSFLSYGNEMEDMEENEWQMVQTKGNQFVVNDQPFYVNGFNTYWLMVFAADESTRGKVTEVFKHASSVGMSVCRTWAFNDGQWRALQKSPSVYDEDVFKALDFVVSEAKKYKIRLILSLVNNWEAYGGKAQYVKWGNAAGLNLTSDDDFFSHPTLRSYYQAHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDSSGDVLQDWIKEMAFYVKSIDTKHLVEIGLEGFYGPSTPQRYQLNPNAFAQQVGTDFIRNHQVLGVDFASVHIYPDSWISQSIADSHLPFIKSWMEAHIEDAEKYLGMPVVFGEFGVSAKAPGFNSSYRDNLVNTVYKTILNSTKKGGSGAGSLVWQLFPDGTDYMDDGYAIVLSKSPSTSSIISLQSTRLALFNSLCSKKCRWGCKKRNVLEKVLYHDEL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0603 438 Gene3D Glycosidases 36 411 - -
Pvu10g0603 438 Pfam Cellulase (glycosyl hydrolase family 5) 51 353 IPR001547 GO:0004553|GO:0071704
Pvu10g0603 438 SUPERFAMILY (Trans)glycosidases 39 395 IPR017853 -
Pvu10g0603 438 PANTHER - 16 438 IPR045053 GO:0004553
Pvu10g0603 438 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 16 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0603 Pvu-Chr10 9674430 9677918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0603 30 438 Glycoside Hydrolase AT5G01930 74.939 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0603 K19355 - gmx:100801139 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0825 8 7802705 7805479 Pvu10g0603 10 9674430 9677918 PCT