Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0696 ATGACAGAGCCAAAACCAAGGTATGCTGTTGTTACTGGAGCAAACAAAGGGATAGGATTGGAGACTGTTAACCAGTTGGCCTCAAATGGAGTGAAGGTGGTGCTCGCTGCCAGAGATGAGAAAAGAGGCCATGAAGCCATTGAGACATTGAAAGAATGTGGTCTCTCTGAGTTGGTGGTTTTTCACCAGCTTGATGTCACTCTCTCTGCTAGTATTCATTCACTAGTAGAGTTTGTCAACACACAGTTTGGGAGACTGGATATATTGGTGAACAATGCAGGAATCAGTGGTGTCAACCCATATGAAATGGAAGGATCAATAATTAACTGGAGGGAACTTACTCAAACTTATGAAATGGCAGAAAAGTGCCTAAGAACAAACTACTATGGTGCAAAGGAAACGACTGAGGCATTTCTTCCCCTTTTGAAATTATCCAACTCACCTAGGATTGTTAATGTTTCCTCCCAAGCAGGGTTGTTAAAGGGGATAGCAAACAAATTGGCTAAAGGGGTGTTTGATGATGCTGAAAATCTTACAGAAGATAGAATAGATGAGGTGCTGAAAGAGTTTATGAAAGACTTTAAAGAAGGTTCATTCGGAAACAAAGGTTGGCCAACCTTCTTGTCTTCCTATATGGTCTCAAAAGCAGCCATGAATTCATACACAAGGATTTTGGCCAAGAAGTATCCAAACTTTTGCATCAATTGTGTGTGTCCTGGTTTTGTGAAAACAGACATAAACAGAAACACTGGCTTCTTATCCGTTGAGCAAGGTGCTGCTAGTGTTGTGAGATTAGCACTGCTTCCCAATGGTTCCCCTTCTGGCCTCTTCTATAGCAGGCAAGAAAAGTCAAACTTTTGA 861 0.4158 MTEPKPRYAVVTGANKGIGLETVNQLASNGVKVVLAARDEKRGHEAIETLKECGLSELVVFHQLDVTLSASIHSLVEFVNTQFGRLDILVNNAGISGVNPYEMEGSIINWRELTQTYEMAEKCLRTNYYGAKETTEAFLPLLKLSNSPRIVNVSSQAGLLKGIANKLAKGVFDDAENLTEDRIDEVLKEFMKDFKEGSFGNKGWPTFLSSYMVSKAAMNSYTRILAKKYPNFCINCVCPGFVKTDINRNTGFLSVEQGAASVVRLALLPNGSPSGLFYSRQEKSNF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0696 286 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 272 IPR036291 -
Pvu8g0696 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Pvu8g0696 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Pvu8g0696 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 211 230 IPR002347 -
Pvu8g0696 286 CDD carb_red_PTCR-like_SDR_c 7 286 IPR045313 GO:0016616
Pvu8g0696 286 Pfam short chain dehydrogenase 8 162 IPR002347 -
Pvu8g0696 286 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 286 - -
Pvu8g0696 286 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 4 286 - -
Pvu8g0696 286 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Pvu8g0696 286 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Pvu8g0696 286 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Pvu8g0696 286 PRINTS Glucose/ribitol dehydrogenase family signature 211 230 IPR002347 -
Pvu8g0696 286 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
Pvu8g0696 286 Gene3D - 2 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0696 Pvu-Chr8 6173449 6175734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0696 9 247 Miscellaneous Gene Families AT2G29150 28.926 9.76e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0696 K15095 - vun:114183121 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0696 8 6173449 6175734 Pvu8g0696 8 6173449 6175734 ECH
Pvu8g0696 8 6173449 6175734 Pvu10g0989 10 34690796 34695515 PCT
Pvu10g0988 10 34678610 34681863 Pvu8g0696 8 6173449 6175734 PCT