Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0695 ATGGCTTCTTATGTAAAATATTTGTACGTTGTTGATGCACCCACGTCCCCACTTGCGCCAATGAGCCACCTCCACTACAAAATTTTGTATGCTGTTGTTACTGGAGCAAATAAAGGGATAGGGTTTGAGACTGTTAAACAGTTGGCCTCAAATGGAGTCAAGGTGGTGCTCACAGCCAGAGATGAGATCAGAGGCCAAGAAGCCATTGGGAGATTGAAAGAGTATGGTCTCTCTGATTTGGTGACTTTTCACCAGCTTGATGTCACTCACTCTGCTAGTATTAATTCTCTAGCTGAGTTTGTAAAGACACAGTTTGGAAAACTTGATATCTTGGTGAACAATGCAGGAATAAGTGGTGTCAATCTGGATGAAGTGGATGAGGGATCAGCATTTAACTGGGAGAAACTCACTCAAACTTGTGCGATGGTTGAAGAGTGCCTAACAACAAACTACTATGGCGCAAAGAAAGCAACTGAGGCATTTCTTCCCCTTCTGCAATTATCCAAGTCTCCTAGGATTGTGAATGTTTCCTCTCAAGCAGGATTCTTAAAGAACATAGCAAACGAATGGGCTAAAGGGGTGCTTAATGATGCTGAAAATCTTACTGAAGAGAAAATAGACGAGGTGCTCAAAGAGTTAATCAAAGACTTCAAAGAAAATTCCTTAGAAACTAAAGGCTGGCCAACCTTCTTGTCTGCCTATGTAGTCTCAAAAGCAGCCATGAACTCATACACAAGAATTCTAGCCAAGAAGCATCCAAACATGTACATAAACAGTGTGTGCCCTGGTTTTGTGAAAACAGACATCAACAAAAATTCTGGCATCTTATCTATTGAGGAAGGTGCTGCTAGTGTTGTGCGATTGGCACTTTTGCCTGATGGTTCCCCTTCTGGCCTTTTCTATGTTAGGCAAGAATTGTCCAACTTTTAA 930 0.4172 MASYVKYLYVVDAPTSPLAPMSHLHYKILYAVVTGANKGIGFETVKQLASNGVKVVLTARDEIRGQEAIGRLKEYGLSDLVTFHQLDVTHSASINSLAEFVKTQFGKLDILVNNAGISGVNLDEVDEGSAFNWEKLTQTCAMVEECLTTNYYGAKKATEAFLPLLQLSKSPRIVNVSSQAGFLKNIANEWAKGVLNDAENLTEEKIDEVLKELIKDFKENSLETKGWPTFLSAYVVSKAAMNSYTRILAKKHPNMYINSVCPGFVKTDINKNSGILSIEEGAASVVRLALLPDGSPSGLFYVRQELSNF* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0695 309 PRINTS Glucose/ribitol dehydrogenase family signature 30 47 IPR002347 -
Pvu8g0695 309 PRINTS Glucose/ribitol dehydrogenase family signature 106 117 IPR002347 -
Pvu8g0695 309 PRINTS Glucose/ribitol dehydrogenase family signature 165 181 IPR002347 -
Pvu8g0695 309 PRINTS Glucose/ribitol dehydrogenase family signature 234 253 IPR002347 -
Pvu8g0695 309 PRINTS Glucose/ribitol dehydrogenase family signature 253 270 IPR002347 -
Pvu8g0695 309 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 30 309 - -
Pvu8g0695 309 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 295 IPR036291 -
Pvu8g0695 309 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 30 309 - -
Pvu8g0695 309 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 221 249 IPR020904 GO:0016491
Pvu8g0695 309 CDD carb_red_PTCR-like_SDR_c 30 309 IPR045313 GO:0016616
Pvu8g0695 309 Gene3D - 27 309 - -
Pvu8g0695 309 Pfam short chain dehydrogenase 230 273 IPR002347 -
Pvu8g0695 309 Pfam short chain dehydrogenase 31 185 IPR002347 -
Pvu8g0695 309 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 106 117 IPR002347 -
Pvu8g0695 309 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 IPR002347 -
Pvu8g0695 309 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 234 253 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0695 Pvu-Chr8 6170197 6172214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0695 32 274 Acyl Lipid Metabolism Gene Families AT1G24360 23.577 2.05e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0695 K15095 - vun:114183121 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0695 8 6170197 6172214 Pvu8g0695 8 6170197 6172214 ECH
Pvu8g0695 8 6170197 6172214 Pvu10g0990 10 34708355 34711190 PCT
Pvu10g0989 10 34690796 34695515 Pvu8g0695 8 6170197 6172214 PCT