Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0670 ATGAAGAGGTTTTGCTCAAACGCATCCTTCATTCTATTAGCCACTCTCATCTTAACAAGTTGTTTTGAGTCTGAGGCTCAAAAGTGTCGACCAAGTGGGAGAATTAGAGGAAAGAAAGCCCCTCCAGGACAGTGCAACCAAGAGAATGATTCTGACTGTTGCAAAGAAGGCAAACTCTACACAGCATATGAATGTTCACCACCTTTGTCCACCCACACCAACGCTTACCTCACTCTTAACAGTTTTCAGAAGGGTGGAGATGGTGGTGGCCCTTCAGAATGTGACAACCAATACCATTCTGATGACACACCCGTCGTTGCACTGTCCACAGGGTGGTTCAACCACAAAAGCAGGTGCCTCCACAACATCACCATCAGTGGGAATGGCAGAAGTGTGGTGGCTATGGTGGTTGATGAATGTGACTCAACTAAGGGATGTGATGCAGACCATGACTATCAACCTCCATGTCCCAACAACACTGTTGATGCTTCCAGAGCTGTCTGGAAAGCATTGGGAGTGCCCCCAAATGAATGGGGTGGCTTGGATATTACATGGTCTGATGCTTGA 567 0.4727 MKRFCSNASFILLATLILTSCFESEAQKCRPSGRIRGKKAPPGQCNQENDSDCCKEGKLYTAYECSPPLSTHTNAYLTLNSFQKGGDGGGPSECDNQYHSDDTPVVALSTGWFNHKSRCLHNITISGNGRSVVAMVVDECDSTKGCDADHDYQPPCPNNTVDASRAVWKALGVPPNEWGGLDITWSDA* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0670 188 PANTHER LIPID TRANSFER PROTEIN 1 188 - -
Pvu8g0670 188 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 1 188 IPR039271 -
Pvu8g0670 188 SUPERFAMILY Barwin-like endoglucanases 67 186 IPR036908 -
Pvu8g0670 188 Gene3D - 74 187 IPR036908 -
Pvu8g0670 188 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0670 Pvu-Chr8 5995745 5996311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0670 - - vra:106758388 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0670 8 5995745 5996311 Pvu8g0670 8 5995745 5996311 ECH
Pvu8g0670 8 5995745 5996311 Pvu10g1008 10 35027367 35028092 PCT