Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1008 ATGAAGGCTTCTACCTCAATAGCATCCTTGATTTTGCTGCTCATTCTCGTATCAGCAAATTGGTTGTGTTGTGAAGCACAACAGTGTCGTCCCAGTGGCAGAATCACAGGAAAGAAGCCCCCACCAGGAGAATGCAACCAAGAGAATGATTCAGAGTGTTGTGTACAAGGCAAGATGTACACAACGTACAAATGTTCTCCAGCAGTGTCAAGCAACACCGAGGCCCAACTCACTCTCAACAGTTTTGAAAAGGGTGGAGATGGAGGAGGGCCTTCTGCATGTGACAACCAGTATCATTCTGATGACACACCAGTGGTTGCACTTTCCACTGGATGGTTTAACAATAGTAGTAGGTGCCTCCACAACGTTACCATCAGTGCAAATGGCAAAAGTGTTGTGGCCATGGTGGTGGACGAGTGTGACTCTACCATGGGATGTGATGAAGACCATGATTATCAACCCCCTTGTTCCAACAACATTGTTGATGCCTCCAAAGCTGTCTGGAATGCCTTAGGTGTGCCTCACAATCAGTGGGGTGGATTGAAAATTACATGGGCTGATGCTTAA 567 0.4674 MKASTSIASLILLLILVSANWLCCEAQQCRPSGRITGKKPPPGECNQENDSECCVQGKMYTTYKCSPAVSSNTEAQLTLNSFEKGGDGGGPSACDNQYHSDDTPVVALSTGWFNNSSRCLHNVTISANGKSVVAMVVDECDSTMGCDEDHDYQPPCSNNIVDASKAVWNALGVPHNQWGGLKITWADA* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1008 188 Gene3D - 72 187 IPR036908 -
Pvu10g1008 188 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 6 188 IPR039271 -
Pvu10g1008 188 SUPERFAMILY Barwin-like endoglucanases 68 186 IPR036908 -
Pvu10g1008 188 PANTHER LIPID TRANSFER PROTEIN 6 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1008 Pvu-Chr10 35027367 35028092 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1008 - - gmx:100785431 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1008 10 35027367 35028092 Pvu10g1008 10 35027367 35028092 ECH
Pvu8g0670 8 5995745 5996311 Pvu10g1008 10 35027367 35028092 PCT