Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0667 ATGATACAAGTTAATGTGACTACATCCATCACACTCCTCCAATCATCCAATTCAATCACTGTAATGGCGAAGGAAGAAGTGTTTGAGTTTCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCTGTAAGGAAGATATCTGAGCTTGTAATTCCCAAATATTATGAGCCGAGAGAGTATGTTGTTCGTGAGGGAGAACGTGGGGATGGTTTTTACTTCATCTGGGAAGGAGAGGCTGAGGTTGTTGGCTCTGTTAATGCTGATGATGATAATCATCCAGAGTTTCTATTGAAAAGATATGACTACTTTGGTTTTGGGTTATCAAATGAAGTTCACCGTGCTGATGTCATAGCTTTGACGAAGCTATCATGCTTGGTACTGCCCCATGAGCATTCAGCATTGCTGCAGTCGAACTCTATCTGGAGTGCAGAAAAATCGGTTGATACATGCTCACTTGTGGAGCATATACTGCATTTGGAACCTATAGAGGTAGATATCTTCCGAGGAATCACTCCTCCAGATGCTCCAAAATTTGGAAAAGTATTTGGTGGACAAATTGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCACAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACATACCCATTATATATCAAGTTAGCCGTGTCCGTGATGGGAAGAGTTTTGCTACTAGGAAAGTGGATGCAATTCAAAAGGGAAACGTCATATTCACAATGCTGGCTTCATTTCATAAGGAAGAATTGGGGTTTCAGCACCAGGAAGTGTCTATCCCATCAGTCCCTGCTCCAAATAAGCTTTTGTCGTTGGAAGAGCTTCGGGAGCTACGTCTTACCGACCCTCGCCTTCCAAGAACTTACCGGAACAAGGTGGCTACAGTTGAATTCATTCCGTGGCCAATAGAGATACGGTTCTGTGAACCTAGAGCTTCAACAAATCAGACCAAATCTCCCCCTAGTTTGAGATACTGGTTCCGAGCAAGGGGAAAACTTTCAGATGATCAGGCCTTGCACAGGTGTGTGGTAGCATACACTTCAGATCTAATCTTTCTTCAAGTGAGTTTGAATCCCAACCGTAGGAAGGGCATGAAGGCACGCGCTGTAAGTCTGGACCACTCCATGTGGTTTCACAGACCTTTAAGAGCCGATGACTGGGTGCTATTTGTGATCTCCAGTCCTACTTCCTGTAATGCCCGTGGCTATGTTACTGGCGAAATGTTCAATCAAAAGGGAGAG 1275 0.4431 MIQVNVTTSITLLQSSNSITVMAKEEVFEFLGNVPLLQRLPGSSVRKISELVIPKYYEPREYVVREGERGDGFYFIWEGEAEVVGSVNADDDNHPEFLLKRYDYFGFGLSNEVHRADVIALTKLSCLVLPHEHSALLQSNSIWSAEKSVDTCSLVEHILHLEPIEVDIFRGITPPDAPKFGKVFGGQIVGQALAAASKSVDCLKVVHSLHVYFLLVGDFNIPIIYQVSRVRDGKSFATRKVDAIQKGNVIFTMLASFHKEELGFQHQEVSIPSVPAPNKLLSLEELRELRLTDPRLPRTYRNKVATVEFIPWPIEIRFCEPRASTNQTKSPPSLRYWFRARGKLSDDQALHRCVVAYTSDLIFLQVSLNPNRRKGMKARAVSLDHSMWFHRPLRADDWVLFVISSPTSCNARGYVTGEMFNQKGE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0667 425 PANTHER ACYL-COA THIOESTERASE 72 425 - -
Pvu8g0667 425 CDD Thioesterase_II_repeat2 167 259 - -
Pvu8g0667 425 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 154 261 IPR029069 -
Pvu8g0667 425 SUPERFAMILY cAMP-binding domain-like 25 133 IPR018490 -
Pvu8g0667 425 Gene3D Jelly Rolls 7 145 IPR014710 -
Pvu8g0667 425 CDD Thioesterase_II_repeat1 334 425 - -
Pvu8g0667 425 SMART cnmp_10 36 153 IPR000595 -
Pvu8g0667 425 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 269 425 IPR029069 -
Pvu8g0667 425 Pfam Cyclic nucleotide-binding domain 55 133 IPR000595 -
Pvu8g0667 425 ProSiteProfiles cAMP/cGMP binding motif profile. 36 106 IPR000595 -
Pvu8g0667 425 PANTHER ACYL-COA THIOESTERASE 72 425 IPR003703 GO:0006637|GO:0047617
Pvu8g0667 425 CDD CAP_ED 36 140 IPR000595 -
Pvu8g0667 425 Gene3D - 150 425 IPR042171 -
Pvu8g0667 425 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 63 79 IPR018488 -
Pvu8g0667 425 Pfam Thioesterase-like superfamily 181 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0667 Pvu-Chr8 5945589 5954113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0667 22 425 Acyl Lipid Metabolism Gene Families AT1G01710 69.059 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0667 K01068 - gmx:100813197 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0667 8 5945589 5954113 Pvu8g0667 8 5945589 5954113 ECH
Pvu8g0667 8 5945589 5954113 Pvu10g1023 10 35197384 35208510 PCT