Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1023 ATGAATTTGAATCGCTGCGTGAAAATGGAGAACGAGAAAGCGTTTGAGTTTCTCGGACGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGTCTGTGAGGAAGATATCTCAACTTGTGGATGTCAAAAGCTGTGAGCCGGGAGAGTATGTTGTTCGCGAGGGTGAACATGGAGATGGCGTGTACTTCATATTGGATGGAGAGGCTGAGGTTGTGGGATCCGTTAGTGCCAATGATGAAAATCGCCCAGAGTTCCAGTTGAAAAGATATGACTACTTTGGTTATGGTTTGTCAAACACAGTTCACCAGGCAGGTGTGGTTGCTTTGTCTAAGCTGACATGCTTAGTGCTTCCCCATGAGCATTCAACACTGCTGCAGCCAAAATCTATCTGGAGAGCCGAAAATTGCGTCGAGACATGCTCACCTGTAGAGAATATATTGCATTTGGAACCCCTGGAGGTAGATATCTTCCAAGGAATTACTCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGGCAGATGATCGGACAGGGACTGGCCGCAGCATCAAAATCCGTTGACTGTCTAAAGGTTGTTCATAGTTTGCATGCCTATTTTATTCTCGCGGGAGATTTAGAAATGCCAATTACATATAAAGTTTATCGTATCCGTGATGGGAGGAGCTTTGCTACAAGGAAAGTAGATGGAATTCAAAAGGGAATTGTCATATTCACTCTGTTGGCTTCATTTCAAAAGGAAGAACTGGGGATGGTTCACCAGAAAGTATCTATACCATCTGTCCCATCTCCAGATAAGCTTCTGCCAATGGAAGAGCTACGGGAGAGACGTCTTACTGACCCTCGTTTACCAGTATCCTACCGGAACAAAGTAGCTACATCTCAATTCATCCCCTGGCCCATAGAGATACGATTATGTGAATATGAAATTTCAACAAATATGACAAAATCTCCTCCAAGTTTGAGATACTGGTTTAGAGCAAAGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGCGTGGTGGCATTTGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCCCACCGTGAGAAGGATTTCAGGACACGTTCTGTTAGTCTGGACCACTCTATGTGGTTTCACCGATCTGTAAAAGCTGATGATTGGGTGCTATTTGCGATCTTTACTCCTAGTGCCCATAGTGCACGCGTCTTTGTGACCGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTCGTATCATTGGTTCAAGAAGGACTAGCCAGGAAAATTAATCAACGAAAATCAGCCATTAAATCCAAGTTGTGA 1314 0.4422 MNLNRCVKMENEKAFEFLGRVPLLQRLPSSSVRKISQLVDVKSCEPGEYVVREGEHGDGVYFILDGEAEVVGSVSANDENRPEFQLKRYDYFGYGLSNTVHQAGVVALSKLTCLVLPHEHSTLLQPKSIWRAENCVETCSPVENILHLEPLEVDIFQGITLPDAPRFGKVFGGQMIGQGLAAASKSVDCLKVVHSLHAYFILAGDLEMPITYKVYRIRDGRSFATRKVDGIQKGIVIFTLLASFQKEELGMVHQKVSIPSVPSPDKLLPMEELRERRLTDPRLPVSYRNKVATSQFIPWPIEIRLCEYEISTNMTKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFLQVSLNPHREKDFRTRSVSLDHSMWFHRSVKADDWVLFAIFTPSAHSARVFVTGQMFNQKGELLVSLVQEGLARKINQRKSAIKSKL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1023 437 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 138 248 IPR029069 -
Pvu10g1023 437 Gene3D Jelly Rolls 6 134 IPR014710 -
Pvu10g1023 437 ProSiteProfiles cAMP/cGMP binding motif profile. 23 93 IPR000595 -
Pvu10g1023 437 SMART cnmp_10 23 140 IPR000595 -
Pvu10g1023 437 PANTHER ACYL-COA THIOESTERASE 59 437 IPR003703 GO:0006637|GO:0047617
Pvu10g1023 437 SUPERFAMILY cAMP-binding domain-like 14 120 IPR018490 -
Pvu10g1023 437 Pfam Thioesterase-like superfamily 169 422 - -
Pvu10g1023 437 Pfam Cyclic nucleotide-binding domain 42 119 IPR000595 -
Pvu10g1023 437 Gene3D - 136 426 IPR042171 -
Pvu10g1023 437 CDD Thioesterase_II_repeat1 321 422 - -
Pvu10g1023 437 PANTHER ACYL-COA THIOESTERASE 59 437 - -
Pvu10g1023 437 CDD CAP_ED 23 120 IPR000595 -
Pvu10g1023 437 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 50 66 IPR018488 -
Pvu10g1023 437 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 256 425 IPR029069 -
Pvu10g1023 437 CDD Thioesterase_II_repeat2 154 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1023 Pvu-Chr10 35197384 35208510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1023 9 437 Acyl Lipid Metabolism Gene Families AT1G01710 63.869 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1023 K01068 - gmx:100797680 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1023 10 35197384 35208510 Pvu10g1023 10 35197384 35208510 ECH
Pvu8g0667 8 5945589 5954113 Pvu10g1023 10 35197384 35208510 PCT