Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0631 ATGGTTTCACATGGAGCTTCCTGTGCTGTGTTTTGGTCTGTGTTCATGATGATTATCACTTTCAGTTTTGCTGGGGACATAGTGCACCATGATAATATTGCTCCCAAGAGGCCTGGCTGTGAGAACAACTTTGTCCTGGTAAAAGTTCCAACTTGGATTGATGGTGTGGAAAACTGTGAGTATGTTGGCGTTGGTGCAAGGTTTGGCCCTACACTGGAATCAAAAGAAAAACGTGCTAACCATACTAGAGTTGCAATTGCGGATCCTCCTGATTGTTGTAGCCTACCTAAGAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGAGGACAGTGTAGTTTCACAACCAAGGCAAATATAGCTGAAAAAGCTGGTGCTTCAGCCATGCTGATTATAAATTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGCAAATGAAACTGATGTTGATATTGGAATACCTACTGTCATGCTTCCACAAGATGCCGGTGAAAACTTGAAAAATCACATACTAAACAACTCAGTGGTGTCTGTGCAGTTGTACTCTCCATATCGTCCATTGGTTGATGTTGCAGAAGTGTTTTTATGGCTTATGGCTGTTGGTACTATTCTCTGTGCTTCTTACTGGTCTGCCTGGACTGTGAGAGAGTCTGCCATTGAGCAGGAGAAGCTATTAAAGGATGCTTCAGATGAATATGTAAATGCAGAGAATGCCGGTTATAGTGCTTATGTGGAAATCAGTACTGCAGCAGCAATATCGTTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAATTCATGACATCATGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGGGTTGAGGGACTACAAACTTGCTTGGTGGCTCTGTTATCATGTTTCAGATGGTTCCAACATGCTGCACAAACATTTGTGAAAGTACCCTTCTTTGGTGCTGTATCATATCTGACAATTGCTGTTACTCCCTTCTGCATAGTGTTTGCTGTGCTTTGGGGTGTTTATCGCCATGTATCATTTGCTTGGGTTGGTCAAGATATTCTTGGTATCACATTGATAATTACAGTTCTTCAGATTGTGCGGATACCTAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTTTATGACATATTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCCATGCTGCTCAAGATACCACGTTTGTTTGATCCTTGGGGTGGCTACAGCATCATTGGTTTTGGGGACATCATCTTACCAGGGCTTCTAGTTGCATTTTCACTAAGGTATGATTGGTTAGCAAAGAAGAACCTTCGAGATGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTCATTACATACATGGCTTTGAACTTGATGGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCGTTTACACTTGGAACCTTTTTGTCACTAGGAAAGAAGAGAGGTGAACTAAAGGTTTTATGGACAAGAGGGGAACCAAAAATACCTTGCCCTCATATCCAAGAGGATCAATCAACAAACCAGTAA 1620 0.4204 MVSHGASCAVFWSVFMMIITFSFAGDIVHHDNIAPKRPGCENNFVLVKVPTWIDGVENCEYVGVGARFGPTLESKEKRANHTRVAIADPPDCCSLPKNKLTGEIILVHRGQCSFTTKANIAEKAGASAMLIINYRTELFKMVCEANETDVDIGIPTVMLPQDAGENLKNHILNNSVVSVQLYSPYRPLVDVAEVFLWLMAVGTILCASYWSAWTVRESAIEQEKLLKDASDEYVNAENAGYSAYVEISTAAAISFVVIASCFLVMLYKFMTSWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQTFVKVPFFGAVSYLTIAVTPFCIVFAVLWGVYRHVSFAWVGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRDGYFLWAMTAYGLGLLITYMALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKVLWTRGEPKIPCPHIQEDQSTNQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0631 539 SUPERFAMILY PA domain 84 139 IPR046450 -
Pvu8g0631 539 Pfam Signal peptide peptidase 244 523 IPR007369 GO:0004190|GO:0016021
Pvu8g0631 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 11 536 IPR007369 GO:0004190|GO:0016021
Pvu8g0631 539 Pfam PA domain 89 167 IPR003137 -
Pvu8g0631 539 Gene3D - 40 184 - -
Pvu8g0631 539 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 11 536 - -
Pvu8g0631 539 Coils Coil 219 239 - -
Pvu8g0631 539 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0631 Pvu-Chr8 5623485 5632513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0631 K09597 - gmx:100808921 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0631 8 5623485 5632513 Pvu8g0631 8 5623485 5632513 ECH
Pvu8g0631 8 5623485 5632513 Pvu10g1039 10 35463967 35471995 PCT