Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1039 ATGGTTTCACTTGGGGCTGTACATAGTGTGGTCTATGTGCTCCTGCTTTCGGTCACTTTGGTTTTGGGTGGGGACATAGTTCACCATGATGATGTTGCCCCCATAAGGCCTGGTTGTGACAACAACTTTGTTTTGGTAAAAGTCCCCACTTGGATTGATGGTGTGGAAAAAAGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCAAAAGAAAAACGTGCCAATCTTACCAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTACAAAGCCTAAGAATAAACTCACCAGCGAGATAATTTTGGTGCACCGAGGAAAATGCAGTTTCACTACAAAGGCAAATATTGCTGATGAAGCTGGTGCTTCAGCCATCCTCATTATAAACTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGAAAATGAAACTGATGTTGATATAGGAATACCTGCTGTCATGCTTCCCCAAGATGCTGGATTGACTTTGGAAAGGCATATTAAAAATAACTCCAATGTGTCCATACAGTTATACTCTCCATTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTTTATGTGCTTCATATTGGTCTGCCTGGAGTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCAGATGACTATATTAATACCGAAAATGTTGGTTCCAGTGGTTATGTGGAAATTAGTACCACAGCAGCAATTTTATTCGTCGTGATTGCTTCATGTTTCTTGGTTATGCTGTATAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTGTTTTGCATTGGCGGGGTTGAGGGACTGCAAACTTGTTTGGTGGCCCTGCTATCATGTTTTAGATGGTTTCGTCAACCTGCCCAGACATTTGTGAAGATACCCTTCTTTGGAGCTGTCTCATATCTGACACTTGCCATTACTCCATTCTGCATAGTGTTTGCCGTGGTTTGGGCAGTTTATCGCCGTGCATCATGGGCTTGGATTGGTCAGGATATTCTCGGTATCACGTTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTAAAGGTTGGAACTGTTCTTCTCAGCTGTGCATTCCTATATGACATCTTTTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTTATGATAGTGGTAGCTCGTGGTGATAAGAGTGGAGAAGATGGCATTCCCATGCTTCTCAAGATACCTCGTCTATTTGACCCTTGGGGTGGTTACAGTATCATTGGATTTGGGGACATAATCTTACCAGGACTTTTAGTGGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGTGCTGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTTCTCATCACATATGTGGCTTTGAACTTGATGGATGGGCATGGTCAGCCAGCTTTGCTTTATATAGTTCCATTTACACTTGGCACCTTTTTGTCATTGGGAAAAAAGAGAGGTGAGCTCAAGATATTATGGACAAGAGGGAAACCAGAAAGGCCTTGCTGTCATATCCAAGAGGATAATCAATCAATTAACAGCCACCATTGA 1626 0.4213 MVSLGAVHSVVYVLLLSVTLVLGGDIVHHDDVAPIRPGCDNNFVLVKVPTWIDGVEKSEYVGVGARFGPTLESKEKRANLTRVVMADPPDCCTKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLTLERHIKNNSNVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWSAREAAIEQEKLLKDASDDYINTENVGSSGYVEISTTAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFRQPAQTFVKIPFFGAVSYLTLAITPFCIVFAVVWAVYRRASWAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGKPERPCCHIQEDNQSINSHH* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1039 541 Gene3D - 41 183 - -
Pvu10g1039 541 Pfam Signal peptide peptidase 243 521 IPR007369 GO:0004190|GO:0016021
Pvu10g1039 541 PANTHER SIGNAL PEPTIDE PEPTIDASE 6 541 IPR007369 GO:0004190|GO:0016021
Pvu10g1039 541 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016021
Pvu10g1039 541 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 6 541 - -
Pvu10g1039 541 Pfam PA domain 89 166 IPR003137 -
Pvu10g1039 541 SUPERFAMILY PA domain 98 136 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1039 Pvu-Chr10 35463967 35471995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1039 K09597 - gmx:100795197 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1039 10 35463967 35471995 Pvu10g1039 10 35463967 35471995 ECH
Pvu8g0631 8 5623485 5632513 Pvu10g1039 10 35463967 35471995 PCT