Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0630 ATGTCAGAAATTGACATGGCAGTTATTAAACCGGAGATGATGAAGCCTTATATCTGGCTTGAGACATCAGATGGTTCAATCCAACAAGTGGAACAAGAAATTGCAATGTATTGCCCATTGATTTGTAAAGAGATAATACAAAAAGGGATGGGGTCTTCCAAGAATTGTGCAATATGTCTTCCTCAGCGAGTCAGTCCTGCAATATTGAGCTTAATTTTTGATTATTGTCGTTTTCATCTAGTACCAGGTCGCTCAAACAAGGAAAGGAAGTCTTACGATGAGAAATTTGTTAGGATGGACACGAAGCGGCTATGTGAGTTGACATCTGCTGCAGATAGCCTTCAGTTGAAGCCATTGGTTGATCTTACAAGTCGGGCACTTGCACGGATAATTGAAGGAAAATCTCCAGAGGAGATACGCGAAATATTTCATTTGCCTGATGATCTAACTGAGGAAGAGAAGTTGGAGCCCTTGAAAAACACAACTGATGACCCAAGGATCAGGCTTTTGAATAGATTGTATGCCAAGAAGAGGAAAGAACTAAAAGAGCGTGAGAGGTTGAAGAGTGTTGAAGCTGAAGAAGAGCATGTAGATAAACGTTCAGTTGATGATCTTTTGTCTTTTATTAATGGAGATGATGAAGATCCAAAGGGCATTAAAACTTCTAAGAATAAAAAGAAAAATAGAAGGAAAAAAGAGCAACATCAGAAGAGCTCTTCTCTGACGGAAGCTTCTAAAGTGACTAAGAAGGAAGTAAATGGTCAAAACATCAGACACCCAAATTCTGAAGCTGATATAATTGCGGAGACTTCAATTTCACATACAGAAGATGTTTTTGCTCATAAGGAGTTTGACGATGGAGATATAGATGATGGGATTGATCCTGCACTTCAGGAAAAAATTGACAGGGAAGTCGAAGATTTTGCCCGCCGATTGAACTCTGACTGGCCGGAGAGGATGCAAGAACTTTTATCATCTGGACATGAAAGGAAGACAATGCTTTTTAGTCCCAATGGAAATAGTTTTCTACGGCGAAATGCTTGA 1044 0.3956 MSEIDMAVIKPEMMKPYIWLETSDGSIQQVEQEIAMYCPLICKEIIQKGMGSSKNCAICLPQRVSPAILSLIFDYCRFHLVPGRSNKERKSYDEKFVRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKSPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERERLKSVEAEEEHVDKRSVDDLLSFINGDDEDPKGIKTSKNKKKNRRKKEQHQKSSSLTEASKVTKKEVNGQNIRHPNSEADIIAETSISHTEDVFAHKEFDDGDIDDGIDPALQEKIDREVEDFARRLNSDWPERMQELLSSGHERKTMLFSPNGNSFLRRNA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0630 347 Pfam Skp1 family, tetramerisation domain 17 80 IPR016073 GO:0006511
Pvu8g0630 347 PANTHER SKP1 1 279 IPR016897 GO:0006511
Pvu8g0630 347 MobiDBLite consensus disorder prediction 240 257 - -
Pvu8g0630 347 MobiDBLite consensus disorder prediction 207 221 - -
Pvu8g0630 347 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Pvu8g0630 347 PANTHER SKP1-LIKE PROTEIN 20 1 279 - -
Pvu8g0630 347 Gene3D Potassium Channel Kv1.1; Chain A 12 162 IPR011333 -
Pvu8g0630 347 MobiDBLite consensus disorder prediction 331 347 - -
Pvu8g0630 347 MobiDBLite consensus disorder prediction 207 257 - -
Pvu8g0630 347 SUPERFAMILY Skp1 dimerisation domain-like 90 160 IPR036296 GO:0006511
Pvu8g0630 347 MobiDBLite consensus disorder prediction 327 347 - -
Pvu8g0630 347 SUPERFAMILY POZ domain 16 80 IPR011333 -
Pvu8g0630 347 SMART skp1_3 15 116 IPR001232 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0630 Pvu-Chr8 5615135 5623427 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0630 - - gmx:100809439 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0630 8 5615135 5623427 Pvu8g0630 8 5615135 5623427 ECH
Pvu10g1040 10 35475200 35488342 Pvu8g0630 8 5615135 5623427 ECH
Pvu8g0630 8 5615135 5623427 Pvu10g1040 10 35475200 35488342 PCT