Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0588 ATGCGTGCGACGAGTCTGGGAGTGAAGGTGTCGTTAGGTGTTATCGGTGTGAGTGTGATATTTGCAGCGCTGAAAATGTCGCAGTTGTTGGACAAAGCTAAGAACTATGTTTCGGAGAAAGTCACGAACATGCCGAAGCCAGAGGCGACTGTCACCGACGTCGATTTCCAGCGCGTGAGCCGCGACAGCGTCCAGTACTTGGCCAAGATTTCTGTCTCCAATCCCTATTCCACTCCCATTCCTATATGTGAGATCAAGTACTCCCTCAAAAGTGCAGGCAGGGAGATAGCATCAGGGATAATACCTGACCCAGGATCGTTGAAGGCAAAAGACTCAACAATGGTGGATGTGCCAGTGAAGGTTCCTCACACTGTGTTGCTGAGCTTGGCAAGGGACATTGGTGCAGATTGGGACATTGATTATCAATTGGATATTGAACTCATCATTGACCTTCCAGTCATTGGAAACATCAGCATTCCTCTTTCTCAGAAGGGAGAGATCAAACTCCCCACAATCAGAGACATGTTTAGTAAATAA 537 0.4749 MRATSLGVKVSLGVIGVSVIFAALKMSQLLDKAKNYVSEKVTNMPKPEATVTDVDFQRVSRDSVQYLAKISVSNPYSTPIPICEIKYSLKSAGREIASGIIPDPGSLKAKDSTMVDVPVKVPHTVLLSLARDIGADWDIDYQLDIELIIDLPVIGNISIPLSQKGEIKLPTIRDMFSK* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0588 178 SMART why 49 166 IPR013990 GO:0009269
Pvu8g0588 178 SUPERFAMILY LEA14-like 26 175 - -
Pvu8g0588 178 Gene3D - 42 176 - -
Pvu8g0588 178 PANTHER - 26 177 IPR045043 -
Pvu8g0588 178 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 26 177 - -
Pvu8g0588 178 Pfam Late embryogenesis abundant protein 69 165 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0588 Pvu-Chr8 5155570 5156806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0588 - - var:108328368 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0588 8 5155570 5156806 Pvu8g0588 8 5155570 5156806 ECH
Pvu8g0588 8 5155570 5156806 Pvu10g1092 10 36418538 36419333 PCT