Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1092 ATGTCGCAGTTGTTGGGTAAAGCGACGAACTTCGTGTCGGAGAAGATAAGCGAAATGGCGAAGCCTGAGGCGAGTGTGAGCGACGTGGACTTCAAGCGCGTGAGCAAAGATAGTATGGAGTACTTGGTGAAGGTCGCTGTTCGTAACCCTTATTCAACTCCGATTCCCATCTGTGAGATCAACTACTCTTTCAAAAGCGCGTCCAGGGAGATAGCATCAGGGACAATTCCGGACCCAGGATCTTTGAAGGGAAAGGACACGACCATGGTGGATGTCCCAGTTAAGGTTCCATACAGCATATTAATGTCCCTTGCTAAGGACATTGGTGCTGACTGGGACATAGACTACCAACTGGATCTTCGGCTCGTTATTGACCTTCCTGTCATTGGCAACTTCACCATCCCTCTCTCTCACAACGGAGAGATCAAGCTTCCAACCCTCTCTACCATGTTTGCCTAG 459 0.4946 MSQLLGKATNFVSEKISEMAKPEASVSDVDFKRVSKDSMEYLVKVAVRNPYSTPIPICEINYSFKSASREIASGTIPDPGSLKGKDTTMVDVPVKVPYSILMSLAKDIGADWDIDYQLDLRLVIDLPVIGNFTIPLSHNGEIKLPTLSTMFA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1092 152 SMART why 24 141 IPR013990 GO:0009269
Pvu10g1092 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Pvu10g1092 152 Gene3D - 17 151 - -
Pvu10g1092 152 PANTHER - 1 152 IPR045043 -
Pvu10g1092 152 SUPERFAMILY LEA14-like 2 150 - -
Pvu10g1092 152 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1092 Pvu-Chr10 36418538 36419333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1092 - - gmx:547533 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1092 10 36418538 36419333 Pvu10g1092 10 36418538 36419333 ECH
Pvu8g0588 8 5155570 5156806 Pvu10g1092 10 36418538 36419333 PCT