Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0492 ATGGAAAACTCTGTTTCATCTCTCTCGCTGCGTTTTCCTCCAAACCCAACGCCCAACTTTTTCCAAGTCTTGAGCTTTAGACCTTCCAAAACCCACCCAAGAAGACCTCCCAGATTCACCACCCCCAGAAAGCAGAGGACCAAGAAGGTAAAACCCTTCACCGAAAAGGACGCGTTTCCATGCTCCTTACCCCTCCACAACAAAAACCCAATCTTCATCTACAAAGACATCAAGCGTTTCGCTCGCCAGAACAAGCTCAAGGAAGCTCTCACCATCTTGGACTACGTGGACCAACGTGGCATTCCCGTGGATTCCACGACTTTCTCTGCTGTCATCGCCGCCTGCATACGTACCAAGTCATTGCCACAAGGGAGGGAAGTTCACATCCATATCAGAATCAATGGTCTCGAAAACAATGTTTTCTTGCGGACAAAGTTGGTTCAAATGTACACCTCATGTGGGTCGTTGGAAGAGGCGCAGAAACTGTTTGAGGGATTGCCCTGTGAGAGTGTCTACCCCTGGAATGCTTTGCTCAGAGGCACTGTGGTTTCTGGGGAAAGACAGTACATTGATGTGCTTAAGACTTATGCTGAGATGAGGGCATTGGGGGTTCAGCTGAATGTGTACAGTTTCTCCAATGTGATCAAGAGCTTCGCCGGCGCATCGGCGTTTTCGGAAGGCTTGAAGACTCATGCGCTTTTGATTAAAAATGGATTTGTGGACAACTACATTCTTAGAACCAGTTTGATTGATATGTACTTCAAGTGTGGGAAGGTTAGGCTTGCTTGCCATGTGTTTGAGGAAATTCCTGAGAGGGATGTTGTCGCGTGGGGGGCGATGCTTGCTGGGTTTGCACACAATAAGATGCAGAAGGAGGTGTTGGAGTATGTGAGGTGGATGGTGAAGGAGGGAATGAAGCCCAATTCGGTTGTGATTGCAATTGCGGTTCCTGTGATTGGGGAGGTTTGTGCGAGGAGGTTGGGTCAGGAGTTTCATGCTTATGTTTTGAAAACGAAATCTTACTCTAAGCAGGTACCGATTCAGTCTGCTTTGATTGATATGTATTGCAAGTGTGGGGATATGATTTCGGCAAGACGGGTTTTTTATGGCTCGAAGGAGAGGAATGTGGTTTGTTGGACGGCTCTGATGGCGGGGTATGCTGTGAATGGAAAACTAGAGCAGGCACTGAGGTCCACCATTTGGATGCAGCAAGAAGGATTCAGGCCTGATGTGGTCACGGTTGCGACTGTTCTTCCAGTCTGTGCACAGTTGAGGGCTCTGGAACAAGGGAGGCAAATTCATGCTTATGCTTTGAAACATTGGTTTCTGCCTAATGTGTCTATAACTTCTCAATTGATGATGATGTACTCTAAGTGTGGTGTTGTTGAGTATTCTAGAAGATTATTTGATAATATGGAACAAAGGAATGTGATTTCGTGGACCGCCATGATTGATTCATTTATAAATAATGGACATCTGTGTGAAGCACTTGGTGTGATGAGGTCAATGCAATTGTCAAAGTACAGGCCTGATTCTGTTGCTATAGGAAGGATGCTGAGTGTTTGTGGTGAACTAAAACTTGTAAAGCTTGGGCAGGAGATTCATGGGCAGATCTTGAAAAGGGACTTTGCACGAGTTCCTTTTGTTTCTGCAGAACTTATAAATACGTATGGTTCATTTGGAGATGTTAACAAGGCTAAGTTGGTGTTTAATGCAGTCCCAGTTAAAGATTCTATAACATGGACCGCTCTTATAAAGGCTTATGGATATAATGAATTTTATCACGATGCAATTAACCTTTTTGATCATATGAGATCTTCTCCGAATCACTTCACTTTTGCCGCCATTCTATCTATATGTGACAGAGCTGGATTTGTTGATGATGCCTGTAGAATCTTCAATTTAATGCCTAAATATAAAATTGAAGCATCTAAGGAACACTTTGCTATTTTGGTGCAACTACTTACCCGCAATGGTCAACTAGAGAAAGCTCAAAGATTTGAACAAATGAGTTCTTTCTTGTAG 2025 0.4415 MENSVSSLSLRFPPNPTPNFFQVLSFRPSKTHPRRPPRFTTPRKQRTKKVKPFTEKDAFPCSLPLHNKNPIFIYKDIKRFARQNKLKEALTILDYVDQRGIPVDSTTFSAVIAACIRTKSLPQGREVHIHIRINGLENNVFLRTKLVQMYTSCGSLEEAQKLFEGLPCESVYPWNALLRGTVVSGERQYIDVLKTYAEMRALGVQLNVYSFSNVIKSFAGASAFSEGLKTHALLIKNGFVDNYILRTSLIDMYFKCGKVRLACHVFEEIPERDVVAWGAMLAGFAHNKMQKEVLEYVRWMVKEGMKPNSVVIAIAVPVIGEVCARRLGQEFHAYVLKTKSYSKQVPIQSALIDMYCKCGDMISARRVFYGSKERNVVCWTALMAGYAVNGKLEQALRSTIWMQQEGFRPDVVTVATVLPVCAQLRALEQGRQIHAYALKHWFLPNVSITSQLMMMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSFINNGHLCEALGVMRSMQLSKYRPDSVAIGRMLSVCGELKLVKLGQEIHGQILKRDFARVPFVSAELINTYGSFGDVNKAKLVFNAVPVKDSITWTALIKAYGYNEFYHDAINLFDHMRSSPNHFTFAAILSICDRAGFVDDACRIFNLMPKYKIEASKEHFAILVQLLTRNGQLEKAQRFEQMSSFL* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0492 674 Pfam PPR repeat 247 273 IPR002885 -
Pvu8g0492 674 Pfam PPR repeat 478 504 IPR002885 -
Pvu8g0492 674 Pfam PPR repeat 452 477 IPR002885 -
Pvu8g0492 674 Pfam PPR repeat 579 606 IPR002885 -
Pvu8g0492 674 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 12 667 - -
Pvu8g0492 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 273 307 IPR002885 -
Pvu8g0492 674 MobiDBLite consensus disorder prediction 31 47 - -
Pvu8g0492 674 TIGRFAM PPR: pentatricopeptide repeat domain 247 275 IPR002885 -
Pvu8g0492 674 TIGRFAM PPR: pentatricopeptide repeat domain 478 511 IPR002885 -
Pvu8g0492 674 TIGRFAM PPR: pentatricopeptide repeat domain 579 607 IPR002885 -
Pvu8g0492 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 375 409 IPR002885 -
Pvu8g0492 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 577 607 IPR002885 -
Pvu8g0492 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 476 510 IPR002885 -
Pvu8g0492 674 Pfam PPR repeat family 374 421 IPR002885 -
Pvu8g0492 674 MobiDBLite consensus disorder prediction 27 51 - -
Pvu8g0492 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 609 643 IPR002885 -
Pvu8g0492 674 Gene3D Tetratricopeptide repeat domain 186 345 IPR011990 GO:0005515
Pvu8g0492 674 Gene3D Tetratricopeptide repeat domain 549 672 IPR011990 GO:0005515
Pvu8g0492 674 Gene3D Tetratricopeptide repeat domain 389 546 IPR011990 GO:0005515
Pvu8g0492 674 Gene3D Tetratricopeptide repeat domain 73 185 IPR011990 GO:0005515
Pvu8g0492 674 PANTHER OS07G0578800 PROTEIN-RELATED 12 667 IPR045215 GO:0003723|GO:0009451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0492 Pvu-Chr8 4279652 4281676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0492 77 667 Glycoside Hydrolase AT3G49170 26.568 2.57e-68 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0492 - - gmx:100809249 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0474 10 6933195 6935672 Pvu8g0492 8 4279652 4281676 PCT