Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0480 ATGGCAACCATGAACCCATTTGATTTGTTGGGTGATGACGCAGAGGACCCTTCTCACCTCATCGCGGCCGAGCAACTCAAGGCCGCGGAAGCGGCTGCGGCGGCCGCGGCGGCTCCCAAGAAGGCTCCGGCTCAGCAGAACAAGCCTGCTCAGCTGCCCACCAAGCCTCCTCCTCCTGCTCAAGCCGTGAAGGAGTCCAGAAATGAACCTGTTCGTGGAGGTCGTGGAGGTGGACGAGGTGCTGGACGTGGGTTTGGACGTGGTCGTGGGTTTAGTCGGGACTCTCCCAATGATGAGAACTCATTTCCTGCTGCTGGAGCTCCTTACAATCAGGGTTCTGTTGAAGAAGGAGATGGTGGGAGGTCTTCTGAAAGACGTGGTTATGGTGGACCACGAGGTCCTTATCGCGGTGGGCGCCGTGGAGGTTTCAGCAATGGTGAAACTGTTGAAAGTGAAGAAGGACGCCCTCGAAGAGCATATGATCGTCGTAGTGGGACGGGTCGAGGAAATGAATTTAAACGTGAAGGTGCTGGTCGTGGCAACTGGGGAACTCAAAATGATGACATTACTGAAACAACTGAGGAAGTCGTGAATGAAACTGAAAAGAATTTGGGAGATGAGAAGCCTGCAGTTGAAGAAGTAGCTGATGGAAACAAGGACAGTCCTGCTAATGAAACTGAAGAGAAAGAGCCTGAAGATAAGGAGATGACTCTGGAGGAATATGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCTTCCAAGCACTCAAGACTGAAGGGAGAAAGGTGGACGCCAAAGAGTTTGAAACCATGCAACCCTTATCAAGCAAAAAGACCAATCATGACATATTCATTAAACTGGGATCTGATAAAGATAAGCGAAAGGAGGCCTTGGAGAAGGAAGAAAAATCCAAGAAGTCTGTTAGCATCACCGAATTCCTGAAGCCTGCTGAAGGGGAAACTTACTACAACCCAGGTGGGCGTGGTAGGGGGCGTGGTGGCCGTGGCTCACGTGGTGGTTATCGTGGAGGTGCTACCAACAATGCACCTGCCCCATCCATTGAAGATCCTGGGCATTTCCCAACCTTGGGTGCCAAGTGA 1098 0.5173 MATMNPFDLLGDDAEDPSHLIAAEQLKAAEAAAAAAAAPKKAPAQQNKPAQLPTKPPPPAQAVKESRNEPVRGGRGGGRGAGRGFGRGRGFSRDSPNDENSFPAAGAPYNQGSVEEGDGGRSSERRGYGGPRGPYRGGRRGGFSNGETVESEEGRPRRAYDRRSGTGRGNEFKREGAGRGNWGTQNDDITETTEEVVNETEKNLGDEKPAVEEVADGNKDSPANETEEKEPEDKEMTLEEYEKVLEERRKAFQALKTEGRKVDAKEFETMQPLSSKKTNHDIFIKLGSDKDKRKEALEKEEKSKKSVSITEFLKPAEGETYYNPGGRGRGRGGRGSRGGYRGGATNNAPAPSIEDPGHFPTLGAK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0480 365 Coils Coil 238 258 - -
Pvu8g0480 365 MobiDBLite consensus disorder prediction 29 239 - -
Pvu8g0480 365 Pfam Hyaluronan / mRNA binding family 156 262 IPR006861 -
Pvu8g0480 365 MobiDBLite consensus disorder prediction 287 308 - -
Pvu8g0480 365 MobiDBLite consensus disorder prediction 195 239 - -
Pvu8g0480 365 MobiDBLite consensus disorder prediction 150 175 - -
Pvu8g0480 365 MobiDBLite consensus disorder prediction 287 365 - -
Pvu8g0480 365 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 365 - -
Pvu8g0480 365 Pfam Stm1 1 77 IPR019084 -
Pvu8g0480 365 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 365 IPR039764 GO:0003723
Pvu8g0480 365 SMART HABP4_PAI_RBP1_2 156 263 IPR006861 -
Pvu8g0480 365 Gene3D - 154 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0480 Pvu-Chr8 4165203 4170250 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0480 K13199 - gmx:100814825 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0480 8 4165203 4170250 Pvu8g0480 8 4165203 4170250 ECH
Pvu10g0513 10 7781808 7784979 Pvu8g0480 8 4165203 4170250 PCT