Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0478 ATGAGGCTTACAATAAGAACACCACACTCCCTCCCTTCAACCCAAACCAAAACCTTCCCAAAACCGAGATGCACAATAACAACAACCCAACCACCCAAACTCTATAATGACATGCGACAAGCCACATTACGTTTAGAGAAAATGATAGACTTAAAAGAAATGATAGACTTCAATGCTCCCTCCATGCAATCATCAAAACTAGCGGAAAGGTGGAAGGAGTACCATGGCATGAGCAATTGGGATGGTTTGCTAGACCCATTAGACGACAACTTACGAGCTGAAATCCTACGGTACGGTCATTTTGTGGAAACAGCGTACAAATCATTCGAGTTTGATCCATCTTCCCCCAACTACGCAAACTCTAGGTTCCATAAAAAAACTCTTTTCGAAAGATGTGGTTTACCTAACTCGGGTTACAAAGTGACCAAGTACCTACGTGCCACCTCAGGCATTCAGTTACCTAGTTGGGTTGACAAAGCACCAACATGGGTAGGAAAACAATCGAGCTATGTTGGATATGTAGCTGTGTGTCACGACAGAGAAGTGATAAAAAGGCTTGGTCGACGGGATATTGTAGTGGCGTACAGAGGAACTACCACATGCTTGGAATGGTTGGAGAATTTTCGTGCCGCGCTCACCAACCTCCATATCTCATGCAAGACCAAAAGAGCCTTTGAAAATAGTGAGGTGATGGAGGGAAGTGGGGCCATGGTGGAAAGTGGATTCCTGAGTCTATACACCTCGTCATGTTCTGCAAACACCTCGTCGCTGCAAGAAATGGTGAAGCGCGAGATTTCAAGGATCGTCCGAATCTATGGCGGGGAGCAGCTGAGTTTGACCGTTACCGGCCACAGCCTGGGAGCGGCATTGTCCACGCTCACAGCCTATGACATGAAAACCGTGTTTCCTAGACTGCCGGTGACGGTCATCTCTTTTGGCGGGCCCCGCGTCGGCGACAGGAGGTTCCGGCGACAGCTGGAGAGGCAAGGGACGAAAGTTTTGCGGATAGTGAACTCTGACGATGTCATCACGAAGGTTCCTGGGTTTGTGTTTGATGATGAGGTGGCGAGCGGTGGAAGGGTCGGCGTGGCGGGGTTTCCGAGGTGGGTGCAGAAGAGGGTGGAGGAGGCACAATGGGTGTACGCTGAGGTTGGGAAGGAACTGCGGTTAAGTAGCAGAGATTCTCCGTACTTAGGAAACACGAACGTTGCAACATGTCACGAGCTCAACACCTACTTGCACCTTGTTGATGGCTTTGTCAGCTCCACCTGTCCCTTTAGAGCCTCCGCTAAGAGGTTTCTCCGACGCTGA 1311 0.495 MRLTIRTPHSLPSTQTKTFPKPRCTITTTQPPKLYNDMRQATLRLEKMIDLKEMIDFNAPSMQSSKLAERWKEYHGMSNWDGLLDPLDDNLRAEILRYGHFVETAYKSFEFDPSSPNYANSRFHKKTLFERCGLPNSGYKVTKYLRATSGIQLPSWVDKAPTWVGKQSSYVGYVAVCHDREVIKRLGRRDIVVAYRGTTTCLEWLENFRAALTNLHISCKTKRAFENSEVMEGSGAMVESGFLSLYTSSCSANTSSLQEMVKREISRIVRIYGGEQLSLTVTGHSLGAALSTLTAYDMKTVFPRLPVTVISFGGPRVGDRRFRRQLERQGTKVLRIVNSDDVITKVPGFVFDDEVASGGRVGVAGFPRWVQKRVEEAQWVYAEVGKELRLSSRDSPYLGNTNVATCHELNTYLHLVDGFVSSTCPFRASAKRFLRR* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0478 436 CDD Lipase_3 140 353 - -
Pvu8g0478 436 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 43 435 - -
Pvu8g0478 436 SUPERFAMILY alpha/beta-Hydrolases 138 394 IPR029058 -
Pvu8g0478 436 Pfam Lipase (class 3) 192 349 IPR002921 GO:0006629
Pvu8g0478 436 Gene3D alpha/beta hydrolase 70 435 IPR029058 -
Pvu8g0478 436 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 43 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0478 Pvu-Chr8 4108718 4110028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0478 18 436 Acyl Lipid Metabolism Gene Families AT2G44810 59.953 1.66e-179 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0478 K16818 - gmx:100800549 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0478 8 4108718 4110028 Pvu8g0478 8 4108718 4110028 ECH
Pvu10g0518 10 7849409 7850671 Pvu8g0478 8 4108718 4110028 PCT