Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0518 ATGAAGCTTGGTGTGAGAGTAGGTTCAATCCAACCACATGCACCACCCTCTATTTCCCAATCCAATACTTCTCCATCTTTCAAATCCAACATAAGCTCACAATTCAACAAGTCTTTGCGACCATGGAACCAACTCAAGCTTCACTCAGCCAAATGCAACTTCCCCAACCTCCGAAACAAATGGAAGCAATACCAAGGAATCAACCATTGGGAAGGCTTGTTGGATCCTCTTGATGACAACCTACGATGGGAAATCCTAAGATATGGCCACTTTGTAGATGCTACCTATACCTCTTTTGACTTCGACCCTTCTTCTCTAACCTATGCCAAATCTCTTTACTCCAAAAAATCACTTCTCAAAAAATGTGGTTTGGGAAAGTATGGTTATCGAATAAGCAAATATCTATATGTGACGTGTGGAATTCACATGCCAAAATGCATAAACAAAATTTTTAAGAAGTTGTTTACTCGATCAAGTTTGATTGGTTATGTGGCAATATGTGTAAATGAGAAAGAAATTACACGACTTGGTCGAAGAGACATTGTGGTTTCTCTCAGAGGAACAATTACATGTTTGGAGTGGTTGGAAAATTTACGTGTGTTCTTAACACACTTGCCGGGTGTTGTGAAGGGAGAAGATGATGTTGGTCCAATGGTGCAGAAGGGTTTTTTGAGCCTTTACACGTCCAAAATCACCCCACATGGAAGTTTGCAAGAGATGATAAGAAAAGAGATTGGAAGACTGATTCAAAGGTACACCAATGAGCCTCTTAGTTTAACCCTAACGGGTCACAGTCTTGGAGCAGCACTAGCCATTTTGAGTGCATATGATATAACTACTACTTTCAACAATGCACCAATGGTTACTGTTATATCATTTGGTGGACCTCGTGTGGGAAATGGGAGTTTTAGGAACCAGTTGGAACAAAAAGGGATTAAGATACTGAGAATAGTGAACTCTGATGATGTTGTCACAAAAGTTCCAGGGCTTTTTGTGAATTTTGATGAAGTGGTAAGTGATGAAGATGTTGGTGTGGGGATTTGGTCAAAATGGTTTTACAAGTACATACAAAATATGAAATTGGTGTATGTTGACATTGGACAAGAGTTGAGGTTAAGTAGCAGAGAGTTTCCATGTCTCAATAAGACAGATGTTGCTATGTGTCATGACCTCAAAACATATCTTCATTTGGTCAAAAATTTTGTAAGCTCCTCTTGTGCTTGCAAACACACAAAAATTCACTCTATTCAGTCATAA 1257 0.3914 MKLGVRVGSIQPHAPPSISQSNTSPSFKSNISSQFNKSLRPWNQLKLHSAKCNFPNLRNKWKQYQGINHWEGLLDPLDDNLRWEILRYGHFVDATYTSFDFDPSSLTYAKSLYSKKSLLKKCGLGKYGYRISKYLYVTCGIHMPKCINKIFKKLFTRSSLIGYVAICVNEKEITRLGRRDIVVSLRGTITCLEWLENLRVFLTHLPGVVKGEDDVGPMVQKGFLSLYTSKITPHGSLQEMIRKEIGRLIQRYTNEPLSLTLTGHSLGAALAILSAYDITTTFNNAPMVTVISFGGPRVGNGSFRNQLEQKGIKILRIVNSDDVVTKVPGLFVNFDEVVSDEDVGVGIWSKWFYKYIQNMKLVYVDIGQELRLSSREFPCLNKTDVAMCHDLKTYLHLVKNFVSSSCACKHTKIHSIQS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0518 418 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 36 414 - -
Pvu10g0518 418 SUPERFAMILY alpha/beta-Hydrolases 106 374 IPR029058 -
Pvu10g0518 418 MobiDBLite consensus disorder prediction 1 30 - -
Pvu10g0518 418 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 36 414 - -
Pvu10g0518 418 CDD Lipase_3 129 336 - -
Pvu10g0518 418 MobiDBLite consensus disorder prediction 13 30 - -
Pvu10g0518 418 Gene3D alpha/beta hydrolase 60 415 IPR029058 -
Pvu10g0518 418 Pfam Lipase (class 3) 182 330 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0518 Pvu-Chr10 7849409 7850671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0518 57 411 Acyl Lipid Metabolism Gene Families AT2G44810 56.267 6.45e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0518 K16818 - gmx:106798329 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0518 10 7849409 7850671 Pvu10g0518 10 7849409 7850671 ECH
Pvu10g0518 10 7849409 7850671 Pvu8g0478 8 4108718 4110028 PCT