Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0171 ATGGATTGTTGGTCCTCTCCTCTGCCGCTTCATGATGAATTCGAGAAGCTTGTCATTCGAATGAACCCTCCAAGAGTCACTGTGGATAATGTTTCGAGTAGGACGGACACTGTGATAAAGGTTGATAGCGCGAACCGGCGCGGGAGTTTGCTGGAGGTGGTTCAGGTTCTCACTGACATGAATCTCGGTGTTAGAAGAGCTTACATTTCCTCTGATGGAGAATGGTTCATGGATGTTTTTCATGTCACGGATCAAAATGGGAAAAAGTTTGAGCAAGATGATGTAGCTGACCGTATTCAACAGTCACTGGGTCCAAGAGCCTCTAGTTTTCGATCGTTGAGAAGATCTGTTGGGGTTCAAGCTGAAGCAGAACACACAACCATTGAATTAACCGGAAGAGACAGGCCAGGGTTGCTTTCAGAAGTTTTTGCTGTTCTTGCAGACCTCAAATGCAATGTGGTTGCAGCAGAAGTCTGGACACACAATTCAAGAATGGCATCTGTTGTTTACATCACAGATGAGGCGACAGGATTGTCCATCGACAATCCAGATCGCCTTGCTAAGATTAAGCAGCTTCTACTGTATGTGCTGAAAGGAGACATAGACAAGAAGAGTGCCAATACTGCTGTTTCTGTTGGTTCTACTCACAAGGATAGGAGGCTGCATCAGTTGATGTACGCCGACCGTGATTATGACATAGACGATGGAGATTCTGGGTCAACAAGTGACAGGAACAAACTCCTTGTAACTGTTGATGATTGCATAGATAAGGGATACACTGTTGTGAACTTGAGGTGTCCGGATAGACCTAAGTTACTGTTTGATACCGTATGCACTCTCACCGACATGCAGTATGTTGTGTACCATGGAACTGTCATTGCTGAAGGACCAGAGGCATATCAGGAATATTTTATAAGGCATGTGGATGGATGTCCTATCAGTTCTGAAGCAGAAAGGCAAAGAGTGATTCATTGTTTGGAGGCCGCTATTAGGAGAAGAACTTCTGAGGGCATAAAGCTAGAACTATGTGGGGAGGACAGGGTTGGCCTTCTGTCTGATGTAACTCGTATCTTCAGAGAAAATGGCCTTTTAGTGAATCGTGCTGAAGTTACAACCAGGGGCACTCAAGCTATGAATGTTTTCTATGTGACTGATGTGACCGGAAATCCAGTTAAGAGTGAAACAATTGAAGCAGTTCGAAAAGAGATTGGCTTGGCCATTCTGCATGTCAAAGATGATGTATGCTCAAAACCTCCACCCCATGAGAGAGGAAAATTCTCTTTGTCTGGTCTTTTTCGATCAAGCTCTGAGAAGTTTCTTTGCAACTTGGGTCTAATGAAGTCTTATTCTTGA 1353 0.4427 MDCWSSPLPLHDEFEKLVIRMNPPRVTVDNVSSRTDTVIKVDSANRRGSLLEVVQVLTDMNLGVRRAYISSDGEWFMDVFHVTDQNGKKFEQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDNPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQLMYADRDYDIDDGDSGSTSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYFIRHVDGCPISSEAERQRVIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLLVNRAEVTTRGTQAMNVFYVTDVTGNPVKSETIEAVRKEIGLAILHVKDDVCSKPPPHERGKFSLSGLFRSSSEKFLCNLGLMKSYS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0171 450 CDD ACT_ACR_4 337 408 - -
Pvu8g0171 450 ProSiteProfiles ACT domain profile. 339 417 IPR002912 -
Pvu8g0171 450 Pfam ACT domain 341 402 IPR002912 -
Pvu8g0171 450 Pfam ACT domain 126 174 IPR002912 -
Pvu8g0171 450 ProSiteProfiles ACT domain profile. 38 118 IPR002912 -
Pvu8g0171 450 SUPERFAMILY ACT-like 124 193 IPR045865 -
Pvu8g0171 450 Gene3D - 125 196 - -
Pvu8g0171 450 ProSiteProfiles ACT domain profile. 127 204 IPR002912 -
Pvu8g0171 450 SUPERFAMILY ACT-like 35 104 IPR045865 -
Pvu8g0171 450 Gene3D - 337 411 - -
Pvu8g0171 450 CDD ACT_ACR_3 259 333 - -
Pvu8g0171 450 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 448 IPR040217 -
Pvu8g0171 450 PANTHER OS08G0515400 PROTEIN 2 448 - -
Pvu8g0171 450 SUPERFAMILY ACT-like 335 404 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0171 Pvu-Chr8 1423425 1426436 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0171 - - gmx:100798999 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0171 8 1423425 1426436 Pvu8g0171 8 1423425 1426436 ECH
Pvu8g0171 8 1423425 1426436 Pvu3g2227 3 43205231 43208556 ECH