Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2227 ATGGAGTGGCCAGCATGTACGGATGAGTACGAGAAGCTCGTAATTCGCATGACCACTCCCAGGGTTGTCATTGATAATGCCGTGTGCTCCACCGCAACAATAGTCAAGGTCGATAGCGGCAGGAAAAACGGGATTCTTTTGGATGCCGTACAAGTGCTTTCTGATCTAAATCTTTCAATTAAGAAGGCTTACATTTCCTCCGATGGGAGATGGTTCATGGATGTTTTCCACGTTACCGATCAAAATGGAAACAAGCTAACCGATCAGAGCGTTTTGAGTTATATTGAACAGTCACTTGGCGGAATTCACAGTGGGAATACTAAGGTCTTAAACGGTCTCACCATCCTTGAATTAACTGGCACAGACCGCGTTGGTCTTCTTTCGGAGGTTTTTGCTGTACTAGCTGAGCAGCAATGTGATGTGGTAAATGCTAAGGTTTGGACTCACAACGGCCGGATTGCCTCCTTAATCTATGTTAAAGACAGCAATTCTGGGACTCTTATCGAGGACTCTCAGAGAATTAGTACTATTGAAGCACGTTTAAGAAATGTTTTAAAGGGTGACAATGATATTAGAAGTGCAAAAACTTCCATCACTAATGCCGTTGTGCACACAGAACGAAAGCTGCACCAAATGATGTACACTGACCGTGATTACCAGAGGAATCCCATTTTCAACTTTACTTCTGATATCCCAGTAGTCACCGTCCAAAATTGGGCCGAAAGGGGTTATTCGGTTGTCAATGTGCAGTGCAAGGATCGAATTAAACTTTTGTTTGATGTTGTCTGTAATTTGACTGACATGGAATATGTTGTGTTCCACGGGACTGTTAAGACAACAGTTGACAAAGCGTATCTGGAGTTTTATATAAGACACAAGGATGGCACTCCAATTAGTTCAGAACCAGAACGTCATCGTGTGATTCAATGCTTGCAAGCTGCAGTGGAGAGAAGGGCATTTGAGGGTGTTATGCTAGAGTTATGTACGGAAGATAGACAGGGGCTTCTAGCAGAAGTGATGAGAACTTTTCGGGAGAATGGGCTGAATGTGACAAGGGCGGAGATATCTACCATTGGGGACAAGACATCAAATGTTTTTTATGTAACGGATGCGATCGGATACCCGGCTGATCCAAAAATAATCGAATCTGTTAGGCAGAAAGTTGGATCGTGCAATTTAAAAGTGAAGGAGTTACCATTGGTATGCCATGAGAAGGCAGAAAGGGAAGATGAAGCAGTTGGGGTTGGTGGGGCAGTGTTGCTGTGTCTGGGGAGCCTCGTGAGAAGGAATCTATACAATTTGGGTTTGATAAAATCGTACTCTTAA 1326 0.4359 MEWPACTDEYEKLVIRMTTPRVVIDNAVCSTATIVKVDSGRKNGILLDAVQVLSDLNLSIKKAYISSDGRWFMDVFHVTDQNGNKLTDQSVLSYIEQSLGGIHSGNTKVLNGLTILELTGTDRVGLLSEVFAVLAEQQCDVVNAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEARLRNVLKGDNDIRSAKTSITNAVVHTERKLHQMMYTDRDYQRNPIFNFTSDIPVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHGTVKTTVDKAYLEFYIRHKDGTPISSEPERHRVIQCLQAAVERRAFEGVMLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGDKTSNVFYVTDAIGYPADPKIIESVRQKVGSCNLKVKELPLVCHEKAEREDEAVGVGGAVLLCLGSLVRRNLYNLGLIKSYS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2227 441 ProSiteProfiles ACT domain profile. 34 112 IPR002912 -
Pvu3g2227 441 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
Pvu3g2227 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Pvu3g2227 441 CDD ACT_ACR_1 32 100 - -
Pvu3g2227 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Pvu3g2227 441 SUPERFAMILY ACT-like 29 99 IPR045865 -
Pvu3g2227 441 SUPERFAMILY ACT-like 111 186 IPR045865 -
Pvu3g2227 441 CDD ACT_ACR_3 244 318 - -
Pvu3g2227 441 Gene3D - 113 187 - -
Pvu3g2227 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Pvu3g2227 441 Gene3D - 321 395 - -
Pvu3g2227 441 SUPERFAMILY ACT-like 322 394 IPR045865 -
Pvu3g2227 441 Pfam ACT domain 324 375 IPR002912 -
Pvu3g2227 441 Pfam ACT domain 114 163 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2227 Pvu-Chr3 43205231 43208556 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2227 - - gmx:100794729 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0171 8 1423425 1426436 Pvu3g2227 3 43205231 43208556 ECH
Pvu3g2227 3 43205231 43208556 Pvu3g2227 3 43205231 43208556 ECH