Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2782 ATGACGCTTGGCTCAGGAGGATCCAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAGCTTGAACGAGGAGAAAAAGGTATTGGAGACGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATCTACATGCGATCTTGGACTGGCACCATTATTGGCCCCCATAATACTGTACATGAAGGAAGAATCTATCAACTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCACGGATCAACATGACCTGTGTTAATCATGAAAATGGAGTGGTTGAACCGAAGAAGTTTGGTCCTCTTGCAAATTGGCAAAGAGAGTACTCCATGGAGGATATACTGACCCAGCTGAAGAAGGAGATGGCAGCTCCTCATAACCGGAAGCTTGTGCAGCCCCCAGAAGGAACCTACTTTTAG 441 0.4649 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHENGVVEPKKFGPLANWQREYSMEDILTQLKKEMAAPHNRKLVQPPEGTYF* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2782 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 9 140 - -
Pvu7g2782 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
Pvu7g2782 146 SMART ubc_7 16 144 - -
Pvu7g2782 146 Gene3D Ubiquitin Conjugating Enzyme 4 146 IPR016135 -
Pvu7g2782 146 Pfam Ubiquitin-conjugating enzyme 43 136 IPR000608 -
Pvu7g2782 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Pvu7g2782 146 PANTHER - 9 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2782 Pvu-Chr7 50842155 50844938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2782 K10704 - pvy:116143857 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2782 7 50842155 50844938 Pvu7g2782 7 50842155 50844938 ECH
Pvu1g2008 1 45977691 45981863 Pvu7g2782 7 50842155 50844938 PCT