Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2773 ATGCCTCCTCCTTCTCCTCTTATTTTCTCTATACTCTGTTTTCTCTCTGTTTTCATCTTCACTTCATCGTCCACACCCAACACCATCACCCTCCCTCTCTCCCACTTATTCACCACACACCCTTCTTCACACCCATTCCACACCCTCAAACTCGCTGTTTCAACTTCCCTCACAAGAGCCCACCACCTCAAAAATCACCAACCCAACCCACCCAAAACCCAAATCCACCCTAAAAGCTACGGAGGTTACTCCATCGACCTCAATTTCGGAACGCCACCTCAAACCTTCTCCTTTATTCTCGACACCGGAAGCACCCTCGTCTGGCTCCCATGCTCCTCCCACTACCTCTGCTCAAATTGCAACAACTTCCACAACTCACCTAAATCTTTCATCCCCAAAAACTCGTCTTCCTCCAAATTCGTGGGCTGCACCAACCCCAAATGCAAGTGGGTCTTCGGCACCAGCGTTGAATCGCGTTGTTGCAAACAAAACAGTGCCACCGCTAACTGTTCACAGACATGCCCTGCTTACACCGTCCAATACGGGCTGGGCTCAACCGCGGGCTTTCTCCTCTCGGAAAATCTCAACTTTCCCGGGAAACTCCTGCCCGATTTTCTCGTCGGATGCTCCATCGTCTCCGTCTACCAGCCAGCCGGAATCGCCGGCTTCGGCCGCGGCCCGGAGTCCCTGCCGTCGCAGATGAACCTCACCGGATTCTCTTACTGCTTGCTCTCACACCAGTTCGACGACTCGCCGGAAACCAGCGACCTCGTCTTGCACACTTCCTCCTCCGACAACAAAAGAACAAACGGCGTCAGCTACACGCCGTTTCGGAAAAACCCCTCCAGCAAAAACCCCGCGTTCGGTGCGTACTATTACCTCACTCTCAGGAGAATCGTCGTTGGGGAGAAGCGCGTGCGCGTTCCGAAGAGGCTTCTAGAGCCTGACGTTAACGGTAACGGCGGCTCTATCGTGGACTCAGGGTCCACCTTCACGTTCATGGAGAGGCCAATTTTTGATTTGGTGGCAGAGGAGTTTGCGAGGCAGGTGAACTACACGCGCGCGAGGGAGATTGAGAAAAAATCCGGGCTGAGTCCGTGTTTTGTGGTGTCTGGAACGGCGACGTTTCCAGAGCTTCGGTTTGAGTTCAGAGGCGGCGCGAAGATGAGTTTGCCGCTGACGAATTATTTCTCGTTGGTCGGGAAATCCGATGTGGCGTGTTTGACTATCGTGTCTGATGACGTGGCGGGTCCCGGCGTGGCGGCTGGGCCCGCTGTGATATTGGGGAACTATCAGCAGCAAAATTTCTACGTTGAGTATGACTTAGGAAACGAGAGGTTCGGTTTTCGGAGTCAGAGTTGCAAAACGCGCGTTTAA 1377 0.5352 MPPPSPLIFSILCFLSVFIFTSSSTPNTITLPLSHLFTTHPSSHPFHTLKLAVSTSLTRAHHLKNHQPNPPKTQIHPKSYGGYSIDLNFGTPPQTFSFILDTGSTLVWLPCSSHYLCSNCNNFHNSPKSFIPKNSSSSKFVGCTNPKCKWVFGTSVESRCCKQNSATANCSQTCPAYTVQYGLGSTAGFLLSENLNFPGKLLPDFLVGCSIVSVYQPAGIAGFGRGPESLPSQMNLTGFSYCLLSHQFDDSPETSDLVLHTSSSDNKRTNGVSYTPFRKNPSSKNPAFGAYYYLTLRRIVVGEKRVRVPKRLLEPDVNGNGGSIVDSGSTFTFMERPIFDLVAEEFARQVNYTRAREIEKKSGLSPCFVVSGTATFPELRFEFRGGAKMSLPLTNYFSLVGKSDVACLTIVSDDVAGPGVAAGPAVILGNYQQQNFYVEYDLGNERFGFRSQSCKTRV* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2773 458 PANTHER OS07G0603500 PROTEIN-RELATED 5 454 - -
Pvu7g2773 458 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 98 109 IPR001969 GO:0004190|GO:0006508
Pvu7g2773 458 Gene3D Acid Proteases 259 458 IPR021109 -
Pvu7g2773 458 CDD pepsin_A_like_plant 82 454 IPR034161 -
Pvu7g2773 458 SUPERFAMILY Acid proteases 79 454 IPR021109 -
Pvu7g2773 458 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Pvu7g2773 458 PRINTS Pepsin (A1) aspartic protease family signature 323 334 IPR001461 GO:0004190|GO:0006508
Pvu7g2773 458 PRINTS Pepsin (A1) aspartic protease family signature 426 441 IPR001461 GO:0004190|GO:0006508
Pvu7g2773 458 Pfam Xylanase inhibitor C-terminal 292 450 IPR032799 -
Pvu7g2773 458 PANTHER BNACNNG47670D PROTEIN 5 454 - -
Pvu7g2773 458 Pfam Xylanase inhibitor N-terminal 83 251 IPR032861 -
Pvu7g2773 458 Gene3D Acid Proteases 72 254 IPR021109 -
Pvu7g2773 458 ProSiteProfiles Peptidase family A1 domain profile. 83 450 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2773 Pvu-Chr7 50747779 50749481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2773 53 454 Miscellaneous Gene Families AT1G44130 23.112 6.87e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2773 - - gmx:100808552 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2773 7 50747779 50749481 Pvu7g2773 7 50747779 50749481 ECH
Pvu1g2017 1 46050524 46052638 Pvu7g2773 7 50747779 50749481 PCT